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13_1_40cm_scaffold_3067

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3067_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1..753)
DNA (753bp) protein (251aa)
luciferase-like monooxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase-like protein id=14626337 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
5,10-methylene tetrahydromethanopterin reductase
13_1_40cm_scaffold_3067_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

812..1303
DNA (492bp) protein (164aa)
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin region
13_1_40cm_scaffold_3067_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1435..3000
DNA (1566bp) protein (522aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DJF0_THETG
ABC-type dipeptide transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter periplasmic protein
13_1_40cm_scaffold_3067_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3114..4730
DNA (1617bp) protein (539aa)
ABC transporter substrate binding protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPV6_THESS
ABC-type dipeptide transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter substrate binding protein
13_1_40cm_scaffold_3067_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5091..6308
DNA (1218bp) protein (406aa)
ABC transporter substrate binding protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPV6_THESS
ABC-type dipeptide transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter substrate binding protein
13_1_40cm_scaffold_3067_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6322..7296
DNA (975bp) protein (325aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5NCG4_9BACI
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_3067_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7304..8275
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036E5B2B
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_3067_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8757..9626
DNA (870bp) protein (290aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodococcus opacus M213 RepID=K8X9Y2_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:ETX05786.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
fadB1; enoyl-CoA hydratase
13_1_40cm_scaffold_3067_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9626..10006
DNA (381bp) protein (127aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein id=4021857 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
13_1_40cm_scaffold_3067_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10003..10959
DNA (957bp) protein (319aa)
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein id=2119288 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
luciferase family protein
13_1_40cm_scaffold_3067_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11012..11395
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_3067_12

Not on your lists

11723..13171
DNA (1449bp) protein (483aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_3067_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13254..13658
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237860B
Uncharacterized protein {ECO:0000313|EMBL:ETW98219.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_scaffold_3067_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13937..15166
DNA (1230bp) protein (410aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
L,L-diaminopimelate aminotransferase id=4231234 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3067_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15150..15899)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037F23AF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_3067_16
unknown

Not on your lists

comp(15979..17940)
DNA (1962bp) protein (654aa)

This feature has no annotations

13_1_40cm_scaffold_3067_17
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17940..18785)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003784A33
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADH63726.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (
13_1_40cm_scaffold_3067_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(18797..19582)
DNA (786bp) protein (262aa)
response regulator receiver protein id=14428717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver protein Tax=CSP1_5_NC10
response regulator receiver protein
13_1_40cm_scaffold_3067_19
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19590..22451)
DNA (2862bp) protein (954aa)
CheA signal transduction histidine kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG21_MEISD
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADH63724.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silv
13_1_40cm_scaffold_3067_20
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(22477..24252)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000368576A
methyl-accepting chemotaxis sensory transducer; K02660 twitching motility protein PilJ Tax=GWC2_Nitrospirae_57_13_curated
methyl-accepting chemotaxis protein
13_1_40cm_scaffold_3067_21
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24249..24929)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJP1_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI21984.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
13_1_40cm_scaffold_3067_22
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

comp(25500..25967)
DNA (468bp) protein (156aa)
chemotaxis protein CheW n=1 Tax=Sphingomonas elodea RepID=UPI000263070C
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RBG_13_Euryarchaeota_61_15_curated
cheW; positive regulator of CheA protein activity
13_1_40cm_scaffold_3067_23
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(25964..26326)
DNA (363bp) protein (121aa)
Response regulator receiver protein id=1893308 bin=GWD2_Nitrospirae-related_57_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH Tax=GWC2_Nitrospirae_57_13_curated
putative chemotaxis regulator CheY
13_1_40cm_scaffold_3067_24
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26615..27427
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BFF1C
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ADZ70857.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)
13_1_40cm_scaffold_3067_25
unknown

Not on your lists

27427..27837
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_scaffold_3067_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

27912..28442
DNA (531bp) protein (177aa)
hypothetical protein id=4219879 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_3067_27
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28462..29271)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003700BD7
Amidohydrolase {ECO:0000313|EMBL:KDN23608.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
amidohydrolase
Displaying 27 items

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