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13_1_40cm_scaffold_3123

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3123_1
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..822)
DNA (822bp) protein (274aa)
AraC family transcriptional regulator n=1 Tax=Leptolyngbya boryana RepID=UPI00038185D1
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AFZ06189.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-
13_1_40cm_scaffold_3123_2
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1038..1454
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae pv. theae ICMP 3923 RepID=S6MYV5_PSESX
cupin
Cupin {ECO:0000313|EMBL:AJY76862.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
13_1_40cm_scaffold_3123_3
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1457..2473
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAQ0_ANASK
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACG74569.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterac
13_1_40cm_scaffold_3123_4
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2623..3324
DNA (702bp) protein (234aa)
Bll4600 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89LE4_BRADU
4-carboxymuconolactone decarboxylase
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein {ECO:0000313|EMBL:EHR06078.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobact
13_1_40cm_scaffold_3123_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3341..3736
DNA (396bp) protein (132aa)
Hybrid protein containing carboxymuconolactone decarboxylase domain and Cupin 2 barrel domain n=1 Tax=Pseudomonas sp. UW4 RepID=K9NJT5_9PSED
Cupin {ECO:0000313|EMBL:AJY68339.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Cupin 2 conserved barrel domain protein
13_1_40cm_scaffold_3123_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3926..4279
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037B0D53
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG74568.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_3123_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4350..4739
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIE4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84456.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_3123_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4807..5094)
DNA (288bp) protein (96aa)
Na+/H+-exchanging protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Na+/H+ antiporter id=14626384 bin=bin7_NC10_sister species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=bin7_NC10_sister organism_group=NC10
Kef-type K+ transport system, membrane component
13_1_40cm_scaffold_3123_9
unknown

Not on your lists

comp(5088..5285)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_3123_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5349..5936)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YZZ9_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EEG09882.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
hypothetical protein
13_1_40cm_scaffold_3123_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5961..6224)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW10_VARPE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_scaffold_3123_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6690..6980)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=4885129 bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein; K09803 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_3123_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7706..8320)
DNA (615bp) protein (205aa)
Glycosyl transferase, group 2 family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase, group 2 family protein id=3975791 bin=GWA2_Methylomirabilis_73_35 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3123_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8915..9175)
DNA (261bp) protein (87aa)
septum formation initiator; K05589 cell division protein FtsB Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Septum formation initiator family protein id=3975793 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
divIC; septum formation initiator family protein
13_1_40cm_scaffold_3123_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9232..10182)
DNA (951bp) protein (317aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=GWA2_Rokubacteria_73_35_curated
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase id=3975795 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3123_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10439..11335)
DNA (897bp) protein (299aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWA2_Rokubacteria_73_35_curated
Polyprenyl synthetase id=3975797 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trans-isoprenyl diphosphate synthase
13_1_40cm_scaffold_3123_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11332..11571)
DNA (240bp) protein (80aa)
XseB; exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=GWA2_Rokubacteria_73_35_curated
Exodeoxyribonuclease 7 small subunit id=3975799 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
XseB; exonuclease VII small subunit
13_1_40cm_scaffold_3123_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11552..12841)
DNA (1290bp) protein (430aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=GWA2_Rokubacteria_73_35_curated
exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=14627995 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
exodeoxyribonuclease VII large subunit
13_1_40cm_scaffold_3123_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12838..13689)
DNA (852bp) protein (284aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RIFCSPLOWO2_02_FULL_Roku
Bifunctional protein FolD id=3975803 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
5, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase
13_1_40cm_scaffold_3123_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13686..14462)
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Metallophosphoesterase id=3975805 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallophosphoesterase
13_1_40cm_scaffold_3123_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14469..14597)
DNA (129bp) protein (43aa)
Ribonuclease Y id=4039892 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 21 items

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