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13_1_40cm_scaffold_321

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_321_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(1..1575)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=5 Tax=Geobacillus RepID=G8N2P4_GEOTH
13_1_40cm_scaffold_321_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1689..2936)
DNA (1248bp) protein (416aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
imidazolonepropionase (EC:3.5.2.7)
Probable imidazolonepropionase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T822_9EURY
13_1_40cm_scaffold_321_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(2990..4018)
DNA (1029bp) protein (343aa)
Transcriptional regulator, ArsR family n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GEV2_9FIRM
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_321_4

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comp(4198..4641)
DNA (444bp) protein (148aa)
Protein containing DUF61 n=1 Tax=uncultured organism RepID=M1P2D2_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_scaffold_321_5
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(5206..6498)
DNA (1293bp) protein (431aa)
Ribosomal biogenesis protein-Nop56/SIK1 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BIV2_HYPBU
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
Ribosomal biogenesis protein-Nop56/SIK1 {ECO:0000313|EMBL:ABM79908.1}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hypertherm
13_1_40cm_scaffold_321_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6573..7478
DNA (906bp) protein (302aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.3.1)
Dihydroorotate dehydrogenase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGE2_ACIB4
13_1_40cm_scaffold_321_7
RBG_16_Archaea_50_20_curated, Archaea

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7781..9535
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_321_8
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9542..11101
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q21_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40222.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
13_1_40cm_scaffold_321_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(11112..12572)
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RBG_16_Archaea_50_20_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000372A517
13_1_40cm_scaffold_321_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12727..14727)
DNA (2001bp) protein (667aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_321_11
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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comp(14776..15759)
DNA (984bp) protein (328aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
DUF2088 domain protein {ECO:0000313|EMBL:ADP09473.1}; TaxID=907718 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote
hypothetical protein
13_1_40cm_scaffold_321_12
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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16126..16734
DNA (609bp) protein (203aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_40cm_scaffold_321_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16766..18079
DNA (1314bp) protein (438aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B202_HERA2
peptidase M16 domain-containing protein
13_1_40cm_scaffold_321_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18069..19334
DNA (1266bp) protein (422aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZJ4_ANATU
peptidase M16 family protein
13_1_40cm_scaffold_321_15
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


19380..19721
DNA (342bp) protein (114aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LM90_THEM4
methionyl-tRNA synthetase
13_1_40cm_scaffold_321_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

19739..20374
DNA (636bp) protein (212aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L056_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ
13_1_40cm_scaffold_321_17
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

20394..20921
DNA (528bp) protein (176aa)
Nucleoside-triphosphatase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796}; Short=NTPase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000255|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosph
Nucleoside-triphosphatase THEP1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
13_1_40cm_scaffold_321_18
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

20949..21590
DNA (642bp) protein (214aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=523849 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLD4_THELI
ribonuclease HII
13_1_40cm_scaffold_321_19
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(21737..22270)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
13_1_40cm_scaffold_321_20
unknown

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comp(22342..22992)
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_scaffold_321_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23086..23514)
DNA (429bp) protein (143aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridiales RepID=B0NE98_CLOSV
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-binding protein
Displaying 21 items

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