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13_1_40cm_scaffold_3229

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3229_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3..3380
DNA (3378bp) protein (1126aa)
PKD domain containing protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I776_METB6
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
PKD domain-containing protein
13_1_40cm_scaffold_3229_2
unknown

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comp(4174..4416)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_scaffold_3229_3
unknown

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comp(4417..4632)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_3229_4
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4759..5007)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI000348FA6E
Putative uncharacterized protein {ECO:0000313|EMBL:EHR60211.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cy
hypothetical protein
13_1_40cm_scaffold_3229_5
unknown

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comp(5842..6168)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_scaffold_3229_6
unknown

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6448..8073
DNA (1626bp) protein (542aa)

This feature has no annotations

13_1_40cm_scaffold_3229_7
unknown

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8200..9528
DNA (1329bp) protein (443aa)

This feature has no annotations

13_1_40cm_scaffold_3229_8
unknown

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9851..11431
DNA (1581bp) protein (527aa)

This feature has no annotations

13_1_40cm_scaffold_3229_9
unknown

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11428..12330
DNA (903bp) protein (301aa)

This feature has no annotations

13_1_40cm_scaffold_3229_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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12384..13388
DNA (1005bp) protein (335aa)
UPI0003CEB07B related cluster n=1 Tax=unknown RepID=UPI0003CEB07B
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_scaffold_3229_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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13609..14868
DNA (1260bp) protein (420aa)
ABC transporter, permease protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAJ1_ACIB4
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_3229_12
unknown

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comp(14876..15334)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_scaffold_3229_13
unknown

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15358..15903
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_scaffold_3229_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15938..16918
DNA (981bp) protein (327aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_3229_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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16930..17967
DNA (1038bp) protein (346aa)
ABC-type oligopeptide transport system, ATPase component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5F0_KORCO
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
oligopeptide ABC transporter ATPase
13_1_40cm_scaffold_3229_16
unknown

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comp(18126..18959)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_40cm_scaffold_3229_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(19533..20291)
DNA (759bp) protein (253aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_1_40cm_scaffold_3229_18
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

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20354..21550
DNA (1197bp) protein (399aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G0_9ARCH
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:ACF09884.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine c
chromosome partitioning ATPase
13_1_40cm_scaffold_3229_19
unknown

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21642..22085
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_scaffold_3229_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(22441..22863)
DNA (423bp) protein (141aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_3229_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(23180..23575)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N943_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_3229_22
unknown

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24007..24102
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 22 items

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