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13_1_40cm_scaffold_3544

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3544_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..1853)
DNA (1851bp) protein (617aa)
Probable TPR-domain containing protein id=3262811 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR-domain containing protein Tax=GWC2_Rokubacteria_70_16_curated
TPR repeats containing protein
13_1_40cm_scaffold_3544_2
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1961..2671)
DNA (711bp) protein (237aa)
Putative uncharacterized protein Tax=GWA2_Deltaproteobacteria_54_12_curated
13_1_40cm_scaffold_3544_3
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2930..4297)
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVZ2_MARPU
Fis family transcriptional regulator {ECO:0000313|EMBL:KIE42017.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
Fis family transcriptional regulator
13_1_40cm_scaffold_3544_4
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4302..6341)
DNA (2040bp) protein (680aa)
GAF domain-containing sensor histidine kinase Tax=CG_Delta_03
Putative uncharacterized protein id=2213256 bin=GWB2_Proteobacteria_55_19 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
sensor histidine kinase, GAF domain-containing
13_1_40cm_scaffold_3544_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6338..6979)
DNA (642bp) protein (214aa)
Eight transmembrane protein EpsH id=4409722 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 92 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
EpsI family protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_3544_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6964..7356)
DNA (393bp) protein (131aa)
transmembrane protein EpsH id=12557480 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Eight transmembrane protein EpsH {ECO:0000313|EMBL:CDI02414.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus
transmembrane protein EpsH
13_1_40cm_scaffold_3544_7
unknown

Not on your lists

comp(7822..9003)
DNA (1182bp) protein (394aa)

This feature has no annotations

13_1_40cm_scaffold_3544_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9000..10430)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036D08DF
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polysaccharide biosynthesis protein
13_1_40cm_scaffold_3544_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10397..11563)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91326.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
13_1_40cm_scaffold_3544_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11567..12019)
DNA (453bp) protein (151aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K0W8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST25046.1}; Flags: Fragment;; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rose
type 11 methyltransferase
13_1_40cm_scaffold_3544_11
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..12707)
DNA (348bp) protein (116aa)
Polysaccharide deacetylase family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CE24_9PLAN
NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97469.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
13_1_40cm_scaffold_3544_12
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12679..13410)
DNA (732bp) protein (244aa)
polysaccharide deacetylase n=1 Tax=Schlesneria paludicola RepID=UPI00029ACE47
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADY59735.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera br
13_1_40cm_scaffold_3544_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13407..14540)
DNA (1134bp) protein (378aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Glycosyl transferase family 2 id=4474572 bin=GWC2_OP3-like_45_7 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
family 2 glycosyl transferase
13_1_40cm_scaffold_3544_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14531..16345)
DNA (1815bp) protein (605aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Asparagine synthetase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYU5_9PLAN
asparagine synthase
13_1_40cm_scaffold_3544_15
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16416..17525)
DNA (1110bp) protein (370aa)
Glycosyl transferase group 1 n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPR2_DESBD
group 1 glycosyl transferase
Tax=BJP_08E140C01_Desulfomicrobium_58_14
13_1_40cm_scaffold_3544_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(17525..18694)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003054721
13_1_40cm_scaffold_3544_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18699..19829)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q7R6_9DELT
putative glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
glycosyltransferase
13_1_40cm_scaffold_3544_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19826..20662)
DNA (837bp) protein (279aa)
glycosyltransferase (EC:2.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YB39_SORCE
hypothetical protein
13_1_40cm_scaffold_3544_19
unknown

Not on your lists

comp(20620..20799)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_3544_20
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(20796..22052)
DNA (1257bp) protein (419aa)
O-antigen polymerase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DK40_DESVM
O-antigen polymerase Tax=RBG_16_Zixibacteria_53_22_curated
O-antigen polymerase
13_1_40cm_scaffold_3544_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22057..23295)
DNA (1239bp) protein (413aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
UDP-glucose 6-dehydrogenase id=3400359 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
nucleotide sugar dehydrogenase
13_1_40cm_scaffold_3544_22
unknown

Not on your lists

comp(23288..23464)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 22 items

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