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13_1_40cm_scaffold_3616

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3616_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(1..936)
DNA (936bp) protein (312aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV59_RUBXD
lactaldehyde dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_scaffold_3616_2
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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1004..1714
DNA (711bp) protein (237aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV70_RUBXD id=1247840 bin=RBG9 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
short chain enoyl-CoA hydratase Tax=RBG_16_Chloroflexi_57_9_curated
13_1_40cm_scaffold_3616_3
unknown

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1830..3791
DNA (1962bp) protein (654aa)
X-Pro dipeptidyl-peptidase domain-containing protein
13_1_40cm_scaffold_3616_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3795..6164)
DNA (2370bp) protein (790aa)
Putative membrane protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E7N3_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EHN10307.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter
hypothetical protein
13_1_40cm_scaffold_3616_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6154..7236)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00035D690B
virulence factor Mce family protein
Virulence factor Mce family protein {ECO:0000313|EMBL:AJE87260.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
13_1_40cm_scaffold_3616_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7233..8609)
DNA (1377bp) protein (459aa)
Virulence factor Mce family protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5N9_9ACTN
Virulence factor Mce family protein {ECO:0000313|EMBL:EHN11002.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Pat
Mammalian cell entry related domain protein
13_1_40cm_scaffold_3616_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8609..9631)
DNA (1023bp) protein (341aa)
MCE family protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9E7_9ACTN
MCE family protein {ECO:0000313|EMBL:EHN09702.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicam
Mammalian cell entry related domain protein
13_1_40cm_scaffold_3616_8
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9628..10785)
DNA (1158bp) protein (386aa)
PE-PGRS family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9USY6_9ACTO
PE-PGRS family protein {ECO:0000313|EMBL:EGD43734.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
mammalian cell entry domain-containing protein
13_1_40cm_scaffold_3616_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10786..11763)
DNA (978bp) protein (326aa)
Virulence factor Mce family protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E3S6_9ACTN
Virulence factor Mce family protein {ECO:0000313|EMBL:EHN11670.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Pat
virulence factor Mce family protein
13_1_40cm_scaffold_3616_10
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11760..12854)
DNA (1095bp) protein (365aa)
Putative oxidoreductase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9USY2_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:EGD43730.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
Mammalian cell entry related domain protein
13_1_40cm_scaffold_3616_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(12855..13643)
DNA (789bp) protein (263aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0X3_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB50049.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexiba
13_1_40cm_scaffold_3616_12
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13658..14500)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B3E13E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE87253.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
13_1_40cm_scaffold_3616_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14504..15283)
DNA (780bp) protein (260aa)
ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6DB40
Putative ABC-transporter integral membrane protein {ECO:0000313|EMBL:EHN10355.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter
hypothetical protein
13_1_40cm_scaffold_3616_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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15455..16018
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SC48_GEOOG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB74216.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geod
13_1_40cm_scaffold_3616_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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16002..17114
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RIP2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02236.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
13_1_40cm_scaffold_3616_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

17131..17907
DNA (777bp) protein (259aa)
ABC-type transport system, ATPase component id=3327051 bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter
13_1_40cm_scaffold_3616_17
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

17996..18841
DNA (846bp) protein (282aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component id=3327047 bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
multi-copper enzyme maturation ABC transporter permease Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter permease
13_1_40cm_scaffold_3616_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18872..19582)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATC4_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG05354.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacte
13_1_40cm_scaffold_3616_19
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

19602..20360
DNA (759bp) protein (253aa)
Methyltransferase family protein id=2283295 bin=GWB2_Chloroflexi_54_36 species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
methyltransferase type 11 Tax=RBG_13_Chloroflexi_50_21_curated
hypothetical protein
13_1_40cm_scaffold_3616_20
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

20541..21956
DNA (1416bp) protein (472aa)
nitrate reductase n=1 Tax=Actinopolymorpha alba RepID=UPI00035D87F5
Cytosine or purine or uracil or thiamine or allantoin permease family protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_scaffold_3616_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22020..23018
DNA (999bp) protein (333aa)
methylenetetrahydromethanopterin reductase; K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBN9_9CHLR
F420-dependent oxidoreductase, CPS_4043 family
13_1_40cm_scaffold_3616_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23037..23882
DNA (846bp) protein (282aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P58_SOLUE
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_scaffold_3616_23
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

23879..25297
DNA (1419bp) protein (473aa)
phenylhydantoinase (EC:3.5.2.-) Tax=RBG_16_RIF_CHLX_72_14_curated
Phenylhydantoinase id=4549158 bin=GWC2_Chloroflexi_73_18 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
pydB; dihydropyrimidinase
13_1_40cm_scaffold_3616_24
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25294..26040
DNA (747bp) protein (249aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5MVK8_9BACL
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL45475.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus
Displaying 24 items

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