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13_1_40cm_scaffold_3709

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3709_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..295
DNA (294bp) protein (98aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38186.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_1_40cm_scaffold_3709_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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296..2713
DNA (2418bp) protein (806aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_40cm_scaffold_3709_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2727..4025
DNA (1299bp) protein (433aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGQ9_CHLTF
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_scaffold_3709_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4027..4635
DNA (609bp) protein (203aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_scaffold_3709_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4632..5192
DNA (561bp) protein (187aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_scaffold_3709_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5189..5938
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_3709_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5956..7131
DNA (1176bp) protein (392aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G3_GEMAT
aminotransferase class V
Aminotransferase class V {ECO:0000313|EMBL:AHG90429.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3709_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7301..8359
DNA (1059bp) protein (353aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
13_1_40cm_scaffold_3709_9
unknown

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8496..9668
DNA (1173bp) protein (391aa)
hypothetical protein
13_1_40cm_scaffold_3709_10
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9744..10100
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y308_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76787.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
13_1_40cm_scaffold_3709_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10206..10427
DNA (222bp) protein (74aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_3709_12
unknown

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10565..10966
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_3709_13

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10979..11374
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S01H1_S01191 {ECO:0000313|EMBL:GAF96331.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein; K08972 putative membrane protein id=14431488 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_3709_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11433..12692
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QT84_9DELT
Xaa-Pro aminopeptidase family enzyme Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M24
13_1_40cm_scaffold_3709_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12723..13829
DNA (1107bp) protein (369aa)
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
putative serine dehydratase domain protein
13_1_40cm_scaffold_3709_16
unknown

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13916..14194
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_3709_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14191..14613
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=2637582 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_3709_18
unknown

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comp(14684..15454)
DNA (771bp) protein (257aa)

This feature has no annotations

13_1_40cm_scaffold_3709_19
unknown

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comp(15435..15929)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_scaffold_3709_20
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16073..16315)
DNA (243bp) protein (81aa)
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
13_1_40cm_scaffold_3709_21
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16312..16989)
DNA (678bp) protein (226aa)
CAAX amino terminal protease n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037BF5F6
hypothetical protein Tax=RBG_16_Ignavibacteria_36_9_curated
CAAX protease
13_1_40cm_scaffold_3709_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17016..17927)
DNA (912bp) protein (304aa)
beta-lactamase domain-containing protein; K06897 id=14431425 bin=bin3_NC10 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
beta-lactamase domain-containing protein; K06897 Tax=CSP1_5_NC10
beta-lactamase domain-containing protein
13_1_40cm_scaffold_3709_23
unknown

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comp(17899..17967)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 23 items

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