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13_1_40cm_scaffold_375

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_375_1
Vulcanisaeta sp. AZ3, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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449..976
DNA (528bp) protein (176aa)
Transcriptional repressor, CopY family n=1 Tax=Thermincola potens (strain JR) RepID=D5X9D4_THEPJ
CopY family transcriptional regulator {ECO:0000313|EMBL:KJR72044.1}; TaxID=1609231 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaet
CopY family transcriptional repressor
13_1_40cm_scaffold_375_2
RBG_16_Archaea_50_20_curated, Archaea

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1005..1694
DNA (690bp) protein (230aa)
Antirepressor regulating drug resistance protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1G1_DESAJ
peptidase M56 BlaR1 Tax=RBG_16_Archaea_50_20_curated
antirepressor regulating drug resistance protein
13_1_40cm_scaffold_375_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1737..3194
DNA (1458bp) protein (486aa)
aldY5; aldehyde dehydrogenase (EC:1.2.1.3)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_scaffold_375_4
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(3676..4602)
DNA (927bp) protein (309aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAJ48840.1}; EC=1.2.7.3 {ECO:0000313|EMBL:BAJ48840.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeo
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N971_9ARCH
13_1_40cm_scaffold_375_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4595..6424)
DNA (1830bp) protein (610aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2-oxoacid:acceptor oxidoreductase, alpha subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5D9CE
13_1_40cm_scaffold_375_6
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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6617..7315
DNA (699bp) protein (233aa)
MIP family channel protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DSA3_METV3
MIP family channel protein
MIP family channel protein {ECO:0000313|EMBL:ADI36013.1}; Flags: Precursor;; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Met
13_1_40cm_scaffold_375_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(7397..7735)
DNA (339bp) protein (113aa)
DUF59 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_40cm_scaffold_375_8
RBG_16_Archaea_50_20_curated, Archaea

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7915..8367
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N943_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_375_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8680..9105
DNA (426bp) protein (142aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_375_10
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9122..9415)
DNA (294bp) protein (98aa)
AcyP; acylphosphatases; K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Deltaproteobacteria_49_23_curated
Acylphosphatase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF7_METFV
acylphosphatase
13_1_40cm_scaffold_375_11
unknown

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comp(9478..9918)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_scaffold_375_12
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10016..11260)
DNA (1245bp) protein (415aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G0_9ARCH
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:ACF09884.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine c
ATPases involved in chromosome partitioning
13_1_40cm_scaffold_375_13
RBG_16_Archaea_50_20_curated, Archaea

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11276..12034
DNA (759bp) protein (253aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6N3_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_1_40cm_scaffold_375_trna_1
unknown

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12269..12380
DNA (112bp)
transferRNA
13_1_40cm_scaffold_375_14
unknown

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comp(12505..13485)
DNA (981bp) protein (327aa)

This feature has no annotations

13_1_40cm_scaffold_375_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13572..14465
DNA (894bp) protein (298aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84733.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_scaffold_375_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(14528..15538)
DNA (1011bp) protein (337aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAI9_ACIB4
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
peptide ABC transporter ATPase
13_1_40cm_scaffold_375_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15559..16521)
DNA (963bp) protein (321aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U1H1_THEAM
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_375_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16640..18019)
DNA (1380bp) protein (460aa)
ABC transporter, permease protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF1_ACIB4
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_375_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18028..19056)
DNA (1029bp) protein (343aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TFU2_THEC1
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_scaffold_375_20
unknown

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comp(19270..22746)
DNA (3477bp) protein (1159aa)

This feature has no annotations

13_1_40cm_scaffold_375_21
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24715..25188)
DNA (474bp) protein (158aa)
Protease, putative n=1 Tax=Shewanella benthica KT99 RepID=A9D526_9GAMM
Protease, putative {ECO:0000313|EMBL:EDQ01345.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica KT99.;
hypothetical protein
Displaying 22 items

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