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13_1_40cm_scaffold_4003

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4003_1
unknown

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3..95
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_scaffold_4003_2

Not on your lists

242..343
DNA (102bp) protein (34aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49109.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_4003_3
unknown

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858..1079
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_4003_4
unknown

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1340..1546
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_4003_5
unknown

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comp(1543..2163)
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_40cm_scaffold_4003_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2991..3713)
DNA (723bp) protein (241aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK1_9CHLR id=1245713 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter
13_1_40cm_scaffold_4003_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3703..4458)
DNA (756bp) protein (252aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID02_XANP2
branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter-like protein
13_1_40cm_scaffold_4003_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4458..5408)
DNA (951bp) protein (317aa)
putative branched-chain amino acid ABC transporter (permease protein) Tax=GWA2_Rokubacteria_73_35_curated
Inner-membrane translocator id=4734631 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid transport system / permease component family protein
13_1_40cm_scaffold_4003_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5410..6180)
DNA (771bp) protein (257aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I5X4_9BRAD
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_scaffold_4003_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6228..7385)
DNA (1158bp) protein (386aa)
ABC transporter substrate-binding protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000378977A
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDN90937.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
amino acid ABC transporter substrate-binding protein
13_1_40cm_scaffold_4003_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7400..8575)
DNA (1176bp) protein (392aa)
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase, M24 family id=3040424 bin=GWC2_Methylomirabilis_70_16 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M24
13_1_40cm_scaffold_4003_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8603..9613)
DNA (1011bp) protein (337aa)
Putative F420-dependent oxidoreductase, Rv2161c family id=3040439 bin=GWC2_Methylomirabilis_70_16 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase-like protein Tax=GWC2_Rokubacteria_70_16_curated
luciferase-like protein
13_1_40cm_scaffold_4003_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9604..10611)
DNA (1008bp) protein (336aa)
luciferase-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative 5,10-methylenetetrahydromethanopterin reductase id=3040432 bin=GWC2_Methylomirabilis_70_16 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase-like protein
13_1_40cm_scaffold_4003_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10589..11866)
DNA (1278bp) protein (426aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative threonine synthase id=3040429 bin=GWC2_Methylomirabilis_70_16 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
threonine synthase
13_1_40cm_scaffold_4003_15
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12164..13591
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZJD9_9NEIS
aromatic ring-opening dioxygenase LigA
Tax=BJP_08E140C01_Dechloromonas_61_78
13_1_40cm_scaffold_4003_16
unknown

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13658..13819
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_scaffold_4003_17
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13984..14463)
DNA (480bp) protein (160aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003712C05
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinopla
13_1_40cm_scaffold_4003_18
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14498..14920)
DNA (423bp) protein (141aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WZP0_MYCKA
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:ETZ51458.1}; TaxID=1335419 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium
13_1_40cm_scaffold_4003_19
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15076..15726)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S462_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
SMP-30/Gluconolaconase/LRE-like region family protein
13_1_40cm_scaffold_4003_20
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15736..16350)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S463_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_scaffold_4003_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16371..16877)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TEH8_BURPP
Malic enzyme
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20758.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
13_1_40cm_scaffold_4003_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17249..17683
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FE75F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16808.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_4003_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17785..18648
DNA (864bp) protein (288aa)
Dehydratase n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G9T2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETX08404.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_4003_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18691..19017)
DNA (327bp) protein (109aa)
Alcohol dehydrogenase adh id=4695045 bin=GWC2_Methylomirabilis_70_16 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adh; alcohol dehydrogenase adh Tax=GWC2_Rokubacteria_70_16_curated
adh; alcohol dehydrogenase adh
Displaying 24 items

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