ggKbase home page

13_1_40cm_scaffold_402

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_402_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15..1355)
DNA (1341bp) protein (447aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_402_2
unknown

Not on your lists

1657..2100
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_scaffold_402_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2335..2760
DNA (426bp) protein (142aa)
UPI0003CE26A4 related cluster n=1 Tax=unknown RepID=UPI0003CE26A4
Uncharacterized protein {ECO:0000313|EMBL:ESW92488.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_1_40cm_scaffold_402_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3350..4033)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E711D
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_40cm_scaffold_402_5

Not on your lists

comp(4132..4539)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000380FF23
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49185.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_scaffold_402_6
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5081..5659
DNA (579bp) protein (193aa)
Putative NADPH:quinone oxidoreductase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2Q3_METPS
putative NADPH:quinone oxidoreductase
Putative NADPH:quinone oxidoreductase {ECO:0000313|EMBL:BAI62975.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanoce
13_1_40cm_scaffold_402_7
Streptomyces lavendulae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5705..6904
DNA (1200bp) protein (400aa)
tetrahydromethanopterin S-methyltransferase subunit A (EC:2.1.1.86)
MmcE n=1 Tax=Streptomyces lavendulae RepID=Q9X5S3_STRLA
MmcE {ECO:0000313|EMBL:AAD32728.1}; TaxID=1914 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lavendulae.;"
13_1_40cm_scaffold_402_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7362..9251
DNA (1890bp) protein (630aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCZ2_9BRAD
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC65331.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;"
ABC transporter substrate-binding protein
13_1_40cm_scaffold_402_9
unknown

Not on your lists

9402..10280
DNA (879bp) protein (293aa)

This feature has no annotations

13_1_40cm_scaffold_402_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10358..11668)
DNA (1311bp) protein (437aa)
Peptidase, ArgE/DapE family n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ56_METH6
Peptidase, ArgE/DapE family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_40cm_scaffold_402_11
unknown

Not on your lists

11751..12104
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_scaffold_402_12
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12188..13120)
DNA (933bp) protein (311aa)
AsnC/Lrp family transcriptional regulator n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LTC9_9EURY
AsnC/Lrp family transcriptional regulator {ECO:0000313|EMBL:EQB67904.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmat
hypothetical protein
13_1_40cm_scaffold_402_13
unknown

Not on your lists

13241..13756
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_scaffold_402_14
unknown

Not on your lists

13840..14187
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_scaffold_402_15

Not on your lists

14314..15021
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BPR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD82465.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter ATP-binding protein
13_1_40cm_scaffold_402_16
unknown

Not on your lists

15057..16625
DNA (1569bp) protein (523aa)

This feature has no annotations

13_1_40cm_scaffold_402_17
unknown

Not on your lists

16639..16983
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_402_18
unknown

Not on your lists

17008..17388
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_scaffold_402_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17546..18205
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58274.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_402_20
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18242..19012
DNA (771bp) protein (257aa)
Uncharacterized protein n=7 Tax=Bacillus RepID=B7JU14_BACC0
metal-binding protein
Metal-binding protein {ECO:0000313|EMBL:AHI31580.1}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salar
13_1_40cm_scaffold_402_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19060..20034
DNA (975bp) protein (325aa)
acetyltransferase n=1 Tax=Rhizobium phaseoli RepID=UPI00031A8D1A
acetyltransferase
Probable acetyltransferase protein {ECO:0000313|EMBL:ACE92372.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
Displaying 21 items

View Taxonomy