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13_1_40cm_scaffold_411

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_411_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(47..364)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_411_2
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(399..1643)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000371BA43
Family 2 glycosyl transferase {ECO:0000313|EMBL:EWG07444.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;
family 2 glycosyl transferase
13_1_40cm_scaffold_411_3
unknown

Not on your lists

comp(2099..2344)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_411_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2353..2841)
DNA (489bp) protein (163aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_411_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2845..3870)
DNA (1026bp) protein (342aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_40cm_scaffold_411_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(4325..4675)
DNA (351bp) protein (117aa)
30S ribosomal protein S19 n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=RS19_THEGJ
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Archaea_50_20_curated
rps19p; 30S ribosomal protein S19P
13_1_40cm_scaffold_411_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(4790..5515)
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=RL2_STAMF
rpl2p; 50S ribosomal protein L2P; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Archaea_50_20_curated
rpl2p; 50S ribosomal protein L2
13_1_40cm_scaffold_411_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(5534..5803)
DNA (270bp) protein (90aa)
50S ribosomal protein L23P n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJY5_PYRSN
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L23
13_1_40cm_scaffold_411_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(5809..6582)
DNA (774bp) protein (258aa)
50S ribosomal protein L4 n=2 Tax=Sulfolobus solfataricus RepID=RL4_SULSO
50S ribosomal protein L4a; K02930 large subunit ribosomal protein L4e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L4P
13_1_40cm_scaffold_411_10

Not on your lists


comp(6589..7593)
DNA (1005bp) protein (335aa)
50S ribosomal protein L3 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE66_ARCPA
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" so
50S ribosomal protein L3
13_1_40cm_scaffold_411_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7594..8448)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZB7_METFV
hypothetical protein; K09142 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_411_12
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8522..9559
DNA (1038bp) protein (346aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Y2_9EURY
Tax=BJP_IG2158_Thermoplasmatales_53_16
13_1_40cm_scaffold_411_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(9585..12563)
DNA (2979bp) protein (993aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_19FT_COMBO_JS1_35_14_curated
tRNA-splicing ligase RtcB n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B9_9ARCH
hypothetical protein
13_1_40cm_scaffold_411_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12671..13117)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI000362E865
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_411_15
unknown

Not on your lists

13168..13413
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_411_trna_1
unknown

Not on your lists

13276..13362
DNA (87bp)
transferRNA
13_1_40cm_scaffold_411_16
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14132..14848)
DNA (717bp) protein (239aa)
3-hydroxyacyl-CoA dehydrogenase (Hbd-5) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29143_ARCFU
hbd-5; 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase (Hbd-5) {ECO:0000313|EMBL:AAB90118.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeogl
13_1_40cm_scaffold_411_17
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

15134..15841
DNA (708bp) protein (236aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
hypothetical protein
13_1_40cm_scaffold_411_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15900..16187)
DNA (288bp) protein (96aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_13_Bathyarchaeota_38_9_curated
nucleic acid binding OB-fold tRNA/helicase-type id=18248164 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
OB-fold nucleic acid binding protein
13_1_40cm_scaffold_411_19
unknown

Not on your lists

comp(16369..16614)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_411_20
unknown

Not on your lists

comp(16598..16747)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 21 items

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