ggKbase home page

13_1_40cm_scaffold_4348

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4348_1
unknown

Not on your lists

comp(294..590)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_scaffold_4348_2
unknown

Not on your lists

698..1453
DNA (756bp) protein (252aa)

This feature has no annotations

13_1_40cm_scaffold_4348_3
unknown

Not on your lists

comp(1773..2006)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_4348_4
unknown

Not on your lists

2168..2869
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_scaffold_4348_5
unknown

Not on your lists

2949..3272
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_scaffold_4348_6
unknown

Not on your lists

3566..3778
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_4348_7
unknown

Not on your lists

3793..3960
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_4348_8
unknown

Not on your lists

comp(4391..4534)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_4348_9
unknown

Not on your lists

comp(4542..5672)
DNA (1131bp) protein (377aa)

This feature has no annotations

13_1_40cm_scaffold_4348_10
unknown

Not on your lists

comp(5757..6083)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_scaffold_4348_11
unknown

Not on your lists

comp(6682..7821)
DNA (1140bp) protein (380aa)

This feature has no annotations

13_1_40cm_scaffold_4348_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8044..8553
DNA (510bp) protein (170aa)
SSU ribosomal protein S18P alanine acetyltransferase n=1 Tax=Metallosphaera cuprina (strain Ar-4) RepID=F4G1M2_METCR
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_1_40cm_scaffold_4348_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8793..9092)
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-directed RNA polymerase subunit K n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1X4_FERFK
RNA polymerase Rpb6
13_1_40cm_scaffold_4348_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9082..9861)
DNA (780bp) protein (260aa)
Archaeal thermosome n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDZ4_NITGG
thsA4; archaeal thermosome Tax=RBG_16_Archaea_50_20_curated
ths; archaeal thermosome
13_1_40cm_scaffold_4348_15
unknown

Not on your lists

10456..10560
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_scaffold_4348_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

11283..12404
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_scaffold_4348_17
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12558..12797
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK15266.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermoph
13_1_40cm_scaffold_4348_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12794..13135)
DNA (342bp) protein (114aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_scaffold_4348_19

Not on your lists

13258..13410
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI000366BD75
Marine sediment metagenome DNA, contig: S01H1_L07576 {ECO:0000313|EMBL:GAF74111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcriptional regulator
13_1_40cm_scaffold_4348_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(13417..14193)
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Putative Orotidine 5'-phosphate decarboxylase / HUMPS family protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6B14 RepID=B3T8S5_9ARCH
13_1_40cm_scaffold_4348_21
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14190..15191)
DNA (1002bp) protein (334aa)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_16_Bathyarchaeota_57_9_curated
Myo-inositol-1-phosphate synthase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5T3_KORCO
myo-inositol-1-phosphate synthase
13_1_40cm_scaffold_4348_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15256..16002)
DNA (747bp) protein (249aa)
Carboxypeptidase n=2 Tax=Thermoplasma volcanium RepID=Q97AQ8_THEVO
metal-dependent carboxypeptidase Tax=RBG_16_Archaea_50_20_curated
metal-dependent carboxypeptidase
Displaying 22 items

View Taxonomy