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13_1_40cm_scaffold_439

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_439_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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3..1493
DNA (1491bp) protein (497aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCV0_THET1
peptidase S9 prolyl oligopeptidase active site domain protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACZ42615.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1
13_1_40cm_scaffold_439_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1606..1818)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000360B594
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AFU58404.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_scaffold_439_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1815..3014)
DNA (1200bp) protein (400aa)
Radical SAM domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMX9_NITGG
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AFU58404.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_scaffold_439_4
Crenarchaeota, Archaea

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3203..3604
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000380997F
13_1_40cm_scaffold_439_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3601..4293)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000373AB61
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_439_6
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4419..4859)
DNA (441bp) protein (147aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GK32_METPE
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ACL17103.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" so
13_1_40cm_scaffold_439_7
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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6228..6932
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0D342_9BACL
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
13_1_40cm_scaffold_439_8

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comp(6982..8349)
DNA (1368bp) protein (456aa)
serS; Serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDD8_9ARCH
Marine sediment metagenome DNA, contig: S06H3_C00781 {ECO:0000313|EMBL:GAI02023.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_scaffold_439_9
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8372..9247
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3N7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX13299.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_scaffold_439_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9254..9595
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60358.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_439_11
unknown

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10223..10810
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_scaffold_439_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(11175..12419)
DNA (1245bp) protein (415aa)
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein; K00441 coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1] Tax=RBG_16_Archaea_50_20_curated
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFM5_9ARCH
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
13_1_40cm_scaffold_439_13
R_WOR_1_53_15, WOR-1, Bacteria

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comp(12423..14012)
DNA (1590bp) protein (530aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4345523 bin=PER_GWC2_41_7 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Mja hyp1 intein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RNA helicase Ski2-like protein
13_1_40cm_scaffold_439_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14017..15039)
DNA (1023bp) protein (341aa)
nuoD1; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE89_NITGG
13_1_40cm_scaffold_439_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15170..15652)
DNA (483bp) protein (161aa)
F420H2 dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ2_NITGG
13_1_40cm_scaffold_439_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(15649..16200)
DNA (552bp) protein (184aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D3 RepID=B3T916_9ARCH
13_1_40cm_scaffold_439_17
unknown

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comp(16389..16787)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_scaffold_439_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16980..17366
DNA (387bp) protein (129aa)
hypothetical protein id=14428582 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_scaffold_439_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17551..18357
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036E6245
TRASH domain-containing protein {ECO:0000313|EMBL:ELZ20654.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_scaffold_439_20
unknown

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18392..18847
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_scaffold_439_21
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(19010..19465)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5T4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47653.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
Displaying 21 items

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