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13_1_40cm_scaffold_4433

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4433_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)
Molybdopterin binding domain protein id=2419455 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
competence-damage associated protein
13_1_40cm_scaffold_4433_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

512..1330
DNA (819bp) protein (273aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=3951909 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_scaffold_4433_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1327..2082
DNA (756bp) protein (252aa)
undecaprenyl pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Undecaprenyl-diphosphatase id=3951908 bin=GWF2_Methylomirabilis_70_14 species=Rheinheimera nanhaiensis genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
undecaprenyl pyrophosphate phosphatase
13_1_40cm_scaffold_4433_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2087..2485
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y2G3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_scaffold_4433_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(2588..3208)
DNA (621bp) protein (207aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
GAF sensor hybrid histidine kinase id=1250979 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative histidine kinase
13_1_40cm_scaffold_4433_6
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3454..4854
DNA (1401bp) protein (467aa)
hypothetical protein Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
13_1_40cm_scaffold_4433_7
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4860..6464)
DNA (1605bp) protein (535aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobactera
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034B1761
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_4433_8
unknown

Not on your lists

6632..7267
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_40cm_scaffold_4433_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7264..7812)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMX4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM30938.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
hypothetical protein
13_1_40cm_scaffold_4433_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7826..8974)
DNA (1149bp) protein (383aa)
peptidase T-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M20B, peptidase T id=1894689 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aminotripeptidase PepT-like protease
13_1_40cm_scaffold_4433_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8971..9678)
DNA (708bp) protein (236aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4800317 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4433_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9675..9962)
DNA (288bp) protein (96aa)
deoxyribonuclease Tax=GWC2_Rokubacteria_70_16_curated
Deoxyribonuclease id=4800315 bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
deoxyribonuclease
13_1_40cm_scaffold_4433_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10372..11718)
DNA (1347bp) protein (449aa)
Peptidase U62 id=5006712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pmbA; protease pmbA; K03592 PmbA protein Tax=GWA2_Rokubacteria_73_35_curated
pmbA; protease pmbA
13_1_40cm_scaffold_4433_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11715..13094)
DNA (1380bp) protein (460aa)
tldD; peptidase TldD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative peptidase TldD id=4888043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tldD; peptidase TldD
13_1_40cm_scaffold_4433_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13250..14050)
DNA (801bp) protein (267aa)
Periplasmic binding protein id=5006709 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
fepB; periplasmic-binding protein
13_1_40cm_scaffold_4433_16
unknown

Not on your lists

comp(14063..14638)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_scaffold_4433_17
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14638..15231)
DNA (594bp) protein (198aa)
MORN variant repeat protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RR52_9DELT
MORN variant repeat protein Tax=CG_Delta_07
MORN repeat-containing protein
13_1_40cm_scaffold_4433_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15228..16556)
DNA (1329bp) protein (443aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidohydrolase id=14627024 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
amidohydrolase
13_1_40cm_scaffold_4433_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16589..17458
DNA (870bp) protein (290aa)
two-component hybrid sensor and regulator Tax=GWA2_Rokubacteria_73_35_curated
Two-component hybrid sensor and regulator id=5006707 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_4433_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17492..18667)
DNA (1176bp) protein (392aa)
glycine oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=GWA2_Rokubacteria_70_23_curated
Putative glycine oxidase id=4584627 bin=GWF2_Methylomirabilis_70_14 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine oxidase ThiO
13_1_40cm_scaffold_4433_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18664..19287)
DNA (624bp) protein (208aa)
thiamine monophosphate synthase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine-phosphate synthase id=5006705 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tenI; carboxythiazole phosphate tautomerase
13_1_40cm_scaffold_4433_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19275..20057)
DNA (783bp) protein (261aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiazole synthase id=4800301 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiazole synthase
13_1_40cm_scaffold_4433_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20057..20260)
DNA (204bp) protein (68aa)
thiamine biosynthesis protein ThiS Tax=GWA2_Rokubacteria_73_35_curated
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein id=14627029 bin=bin7_NC10_sister species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sulfur carrier protein ThiS
13_1_40cm_scaffold_4433_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20510..21748
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD7_BRAJP
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
sugar ABC transporter substrate-binding protein
Displaying 24 items

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