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13_1_40cm_scaffold_4858

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4858_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1092
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036A20E3
Uncharacterized protein {ECO:0000313|EMBL:ETW96496.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
benzoylformate decarboxylase
13_1_40cm_scaffold_4858_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1168..2376)
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase id=3814357 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyl-CoA dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
putative acyl-CoA dehydrogenase
13_1_40cm_scaffold_4858_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2430..2555)
DNA (126bp) protein (42aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Probable acetolactate synthase large subunit id=4143235 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4858_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2507..3985)
DNA (1479bp) protein (493aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Acetolactate synthase id=4736650 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4858_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4088..4930
DNA (843bp) protein (281aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Volvox carteri RepID=D8U5Z3_VOLCA
Uncharacterized protein {ECO:0000313|EMBL:ETX00967.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Formamidopyrimidine-DNA glycosylase
13_1_40cm_scaffold_4858_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5036..5560
DNA (525bp) protein (175aa)
3-hydroxyanthranilate 3,4-dioxygenase; K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] id=7716989 bin=BACIGN_2 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
Uncharacterized protein {ECO:0000313|EMBL:ETX03838.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_4858_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5606..5911)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GF9_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ETX04464.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
antibiotic biosynthesis monooxygenase family protein
13_1_40cm_scaffold_4858_8
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6019..6252)
DNA (234bp) protein (78aa)
Competence protein ComEA {ECO:0000313|EMBL:ENH97532.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;
13_1_40cm_scaffold_4858_9
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6282..6587)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J3Q4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ10246.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
13_1_40cm_scaffold_4858_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6613..7473)
DNA (861bp) protein (287aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=2642971 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_scaffold_4858_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7470..8612)
DNA (1143bp) protein (381aa)
alkanal monooxygenase id=14627403 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alkanal monooxygenase Tax=CSP1_6_Rokubacteria
alkanal monooxygenase
13_1_40cm_scaffold_4858_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9511..9954
DNA (444bp) protein (148aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase M24 id=2592718 bin=GWC2_Methylomirabilis_70_24 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_4858_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10006..10905)
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Uncharacterized protein id=4148511 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_4858_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10902..11654)
DNA (753bp) protein (251aa)
8 dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) id=4148512 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
dehydrogenase
13_1_40cm_scaffold_4858_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11707..12183
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein id=14430577 bin=bin3_NC10 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4858_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(12399..12908)
DNA (510bp) protein (170aa)
ferripyochelin binding protein (fbp) id=14627404 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferripyochelin binding protein (fbp) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ferripyochelin binding protein (fbp)
13_1_40cm_scaffold_4858_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13008..14039
DNA (1032bp) protein (344aa)
aminoglycoside phosphotransferase; K06979 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminoglycoside phosphotransferase
13_1_40cm_scaffold_4858_18
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14092..14853)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5E50E
Uncharacterized protein {ECO:0000313|EMBL:KFN44529.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
conserved exported protein of unknown function
13_1_40cm_scaffold_4858_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15244..15822)
DNA (579bp) protein (193aa)
sortase family protein, Peptidase C60; K07284 sortase A [EC:3.4.22.70] Tax=GWA2_Rokubacteria_73_35_curated
Sortase family protein, Peptidase C60 id=4221594 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sortase family protein, Peptidase C60
13_1_40cm_scaffold_4858_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15819..17885)
DNA (2067bp) protein (689aa)
Putative uncharacterized protein id=4221592 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07114 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_4858_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17888..18529)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBU6_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_4858_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18750..21353)
DNA (2604bp) protein (868aa)
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator Tax=GWA2_Rokubacteria_73_35_curated
Putative transmembrane signal transduction receptor and sigma-54 dependent response regulator id=4221518 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane signal transduction receptor and sigma-54 dependent response regulator
13_1_40cm_scaffold_4858_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21368..22651)
DNA (1284bp) protein (428aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat id=4221516 bin=GWA2_Methylomirabilis_73_35 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_4858_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22808..23995)
DNA (1188bp) protein (396aa)
putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Acetyl-CoA C-acetyltransferase id=4599720 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA acetyltransferase
13_1_40cm_scaffold_4858_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24023..24373)
DNA (351bp) protein (117aa)
putative Endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
COG0251: Putative translation initiation inhibitor, yjgF family id=2937744 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4858_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24493..24921
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626169 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4858_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24924..25418
DNA (495bp) protein (165aa)
metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_4858_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25431..26099)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_4858_29
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26164..26553)
DNA (390bp) protein (130aa)
Enoyl-CoA hydratase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0G3_STRRD
enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:ACZ89169.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (str
13_1_40cm_scaffold_4858_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26559..26831)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 34 in total

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