name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_scaffold_4867_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(3..122)
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DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA gyrase subunit B id=3212582 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA gyrase subunit B
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13_1_40cm_scaffold_4867_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(119..1174)
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DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA replication and repair protein RecF id=3212580 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recF; DNA replication and repair protein recf
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13_1_40cm_scaffold_4867_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1211..2305)
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dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=14625298 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
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13_1_40cm_scaffold_4867_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(2469..3764)
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dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chromosomal replication initiator protein DnaA id=3212576 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dnaA; chromosomal replication initiator protein dnaA
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13_1_40cm_scaffold_4867_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
4031..4165
|
50S ribosomal protein L34 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX3_CHLTF
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L34
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13_1_40cm_scaffold_4867_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
4748..6436
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Membrane protein insertase YidC id=2324956 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
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13_1_40cm_scaffold_4867_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
7260..8048
|
Chromosome partitioning ATPase Soj id=2324958 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
chromosome partitioning ATPase Soj; K03496 chromosome partitioning protein Tax=GWA2_Rokubacteria_73_35_curated
soj1; sporulation initiation inhibitor protein Soj
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13_1_40cm_scaffold_4867_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
8675..9733
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tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA-specific 2-thiouridylase MnmA id=2324960 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA-specific 2-thiouridylase mnmA
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13_1_40cm_scaffold_4867_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
9828..10442
|
Sodium-transporting two-sector ATPase (EC:3.6.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sodium-transporting two-sector ATPase (EC:3.6.3.15)
ATP synthase subunit b id=2324961 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
10445..10993
|
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta id=2324962 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_11
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(11207..11848)
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Uncharacterized protein n=1 Tax=Sutterella sp. CAG:397 RepID=R7C2E2_9BURK
hypothetical protein Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
acetylglutamate semialdehyde dehydrogenase
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13_1_40cm_scaffold_4867_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
12115..12522
|
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit alpha id=2324963 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
12529..13404
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atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain id=2324964 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
13401..14822
|
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=GWA2_Rokubacteria_73_35_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta id=3212391 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_1_40cm_scaffold_4867_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
14823..15206
|
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain id=3299513 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15329..15715
|
ompR; response regulator receiver Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component transcriptional regulator, winged helix family id=3299511 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
|
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13_1_40cm_scaffold_4867_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15700..16398
|
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with PAS/PAC sensor id=3299509 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HDIG domain-containing protein
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13_1_40cm_scaffold_4867_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
16454..17203
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3299507 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_4867_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
17200..18684
|
osmosensitive K+ channel signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Integral membrane sensor signal transduction histidine kinase id=3299505 bin=GWA2_Methylomirabilis_73_35 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane sensor signal transduction histidine kinase
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13_1_40cm_scaffold_4867_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
18719..18997
|
Putative uncharacterized protein id=3299399 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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13_1_40cm_scaffold_4867_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
18997..19272
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3212383 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
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13_1_40cm_scaffold_4867_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19269..19865
|
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-polyprenyl-4-hydroxybenzoate decarboxylase id=2319271 bin=GWA2_Methylomirabilis_73_35 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase
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13_1_40cm_scaffold_4867_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19895..20521
|
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase domain protein id=2319273 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase-like protein
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