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13_1_40cm_scaffold_520

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_520_1
unknown

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comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_40cm_scaffold_520_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(95..1504)
DNA (1410bp) protein (470aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
13_1_40cm_scaffold_520_3
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

1557..1889
DNA (333bp) protein (111aa)
Cupin 2, conserved barrel n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS53_RUBXD
cupin 2 barrel domain-containing protein
Tax=BJP_IG2069_Anaerolineales_43_63
13_1_40cm_scaffold_520_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1898..2173)
DNA (276bp) protein (92aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Kted
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TI11_9CHLR
hypothetical protein
13_1_40cm_scaffold_520_5
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2192..2440)
DNA (249bp) protein (83aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUD9_ALKMQ
alkylhydroperoxidase
13_1_40cm_scaffold_520_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2449..3435)
DNA (987bp) protein (329aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEB4_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_scaffold_520_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3566..4204)
DNA (639bp) protein (213aa)
hydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Zn-dependent hydrolases, including glyoxylases id=14429445 bin=bin3_NC10 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin3_NC10 organism_group=NC10
beta-lactamase-like protein
13_1_40cm_scaffold_520_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4201..5169)
DNA (969bp) protein (323aa)
TrxB2; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thioredoxin reductase n=3 Tax=Caldanaerobacter subterraneus RepID=Q8R817_THETN
TrxB2; thioredoxin reductase
13_1_40cm_scaffold_520_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5150..5518)
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_520_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5518..6255)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_520_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6270..6992)
DNA (723bp) protein (241aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured gamma proteobacterium RepID=H5SE57_9GAMM
fabG10; 3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_520_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6997..7272)
DNA (276bp) protein (92aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMK2_THEM7
13_1_40cm_scaffold_520_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7303..7446)
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_520_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7443..8249)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K7_GEMAT
hypothetical protein; K07053 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PHP domain protein
13_1_40cm_scaffold_520_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8299..8568)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A956_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_520_16
unknown

Not on your lists

comp(8569..8883)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_scaffold_520_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8886..10247)
DNA (1362bp) protein (454aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
Dihydrolipoamide acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_40cm_scaffold_520_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10322..11302)
DNA (981bp) protein (327aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Transketolase central region
13_1_40cm_scaffold_520_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11303..12358)
DNA (1056bp) protein (352aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
13_1_40cm_scaffold_520_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12435..12650
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7ILK6_9BURK
putative mercuric ion binding protein; K07213 copper chaperone Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_520_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12647..12937)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A960_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_520_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12974..15892)
DNA (2919bp) protein (973aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Copper-transporting P-type ATPase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YU20_MELRP
copper-transporting P-type ATPase
13_1_40cm_scaffold_520_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15963..17138)
DNA (1176bp) protein (392aa)
inositol-3-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A962_GEMAT
Myo-inositol-1-phosphate synthase
13_1_40cm_scaffold_520_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17141..17839)
DNA (699bp) protein (233aa)
putative phosphatidylinositol synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative phosphatidylinositol synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A963_GEMAT
CDP-alcohol phosphatidyltransferase
13_1_40cm_scaffold_520_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17836..19053)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A964_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_520_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19171..20796
DNA (1626bp) protein (542aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
glycoside hydrolase family 3 domain protein
13_1_40cm_scaffold_520_27
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

20793..21992
DNA (1200bp) protein (400aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A965_GEMAT
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
beta-lactamase
13_1_40cm_scaffold_520_28
unknown

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comp(22001..22099)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 28 items

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