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13_1_40cm_scaffold_5388

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5388_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..739)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000382B3E3
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_1_40cm_scaffold_5388_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(745..1710)
DNA (966bp) protein (322aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_1_40cm_scaffold_5388_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1707..2516)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_5388_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2606..4879
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
mmpL; hypothetical protein; K06994 putative drug exporter of the RND superfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_5388_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4876..5103)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_5388_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5142..5522)
DNA (381bp) protein (127aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_5388_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5628..7202)
DNA (1575bp) protein (525aa)
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
13_1_40cm_scaffold_5388_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7264..8394)
DNA (1131bp) protein (377aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
DNA polymerase I
13_1_40cm_scaffold_5388_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8474..8674)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WL82_GEOS8
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_5388_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8821..11043)
DNA (2223bp) protein (741aa)
putative soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lytic transglycosylase catalytic n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF73_ROSCS
lytic transglycosylase catalytic
13_1_40cm_scaffold_5388_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11040..11246)
DNA (207bp) protein (69aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_5388_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11192..12316)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_5388_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12376..13203
DNA (828bp) protein (276aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
protein kinase
13_1_40cm_scaffold_5388_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13223..13777
DNA (555bp) protein (185aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWC2_Gemmatimonadetes_71_10_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
13_1_40cm_scaffold_5388_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14139..15467
DNA (1329bp) protein (443aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_40cm_scaffold_5388_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15468..16334)
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
AraC family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
AraC family transcriptional regulator
13_1_40cm_scaffold_5388_17
unknown

Not on your lists

16353..16934
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_scaffold_5388_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16910..17422)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F622E
Appr-1-p processing domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
13_1_40cm_scaffold_5388_19
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17419..18945)
DNA (1527bp) protein (509aa)
beta-lactamase Tax=GWA2_Ignavibacteria_54_16_curated
Beta-lactamase family protein id=4605543 bin=GWC2_Ignavibacteria_56_12 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
beta-lactamase
13_1_40cm_scaffold_5388_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19043..19894
DNA (852bp) protein (284aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
13_1_40cm_scaffold_5388_21
unknown

Not on your lists

20392..21690
DNA (1299bp) protein (433aa)

This feature has no annotations

13_1_40cm_scaffold_5388_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22298..22501
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_5388_23
unknown

Not on your lists

22498..23385
DNA (888bp) protein (296aa)

This feature has no annotations

13_1_40cm_scaffold_5388_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23418..24176
DNA (759bp) protein (253aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_5388_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24181..25650)
DNA (1470bp) protein (490aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_40cm_scaffold_5388_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

25778..26362
DNA (585bp) protein (195aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=12555739 bin=CNBR_ACIDO species=unknown genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
monofunctional biosynthetic peptidoglycan transglycosylase
Displaying 26 items

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