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13_1_40cm_scaffold_5873

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5873_1
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..540)
DNA (522bp) protein (174aa)
Chromate transporter n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZ51_PSEUL
chromate transporter
Chromate transporter {ECO:0000313|EMBL:BAK78160.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkian
13_1_40cm_scaffold_5873_2
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537..1070)
DNA (534bp) protein (178aa)
Chromate transport protein ChrA n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNG2_AZOSU
Chromate transport protein ChrA {ECO:0000313|EMBL:CDY78391.1}; Chromate transporter {ECO:0000313|EMBL:KDR38868.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; B
chromate transport protein ChrA
13_1_40cm_scaffold_5873_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1067..1387)
DNA (321bp) protein (107aa)
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
13_1_40cm_scaffold_5873_4
unknown

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2092..2358
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_5873_5
unknown

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comp(3028..3852)
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_scaffold_5873_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4231..4641
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae UCICRE 6 RepID=V3EZV9_KLEPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23979.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
13_1_40cm_scaffold_5873_7
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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4905..5414
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003653C75
hypothetical Protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_scaffold_5873_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5578..6045
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036766CC
Uncharacterized protein {ECO:0000313|EMBL:EIT71224.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
13_1_40cm_scaffold_5873_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6056..6445)
DNA (390bp) protein (130aa)
oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldo/keto reductase id=3139747 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase
13_1_40cm_scaffold_5873_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6643..6846)
DNA (204bp) protein (68aa)
oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_5873_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6982..7341
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_5873_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7441..8529
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CBC11
Uncharacterized protein {ECO:0000313|EMBL:ETX02661.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Mandelate racemase
13_1_40cm_scaffold_5873_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8567..9190)
DNA (624bp) protein (208aa)
Putative uncharacterized protein id=3670146 bin=GWA2_Methylomirabilis_73_35 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07006 Tax=GWC2_Rokubacteria_70_16_curated
phosphohydrolase
13_1_40cm_scaffold_5873_14
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9347..9829
DNA (483bp) protein (161aa)
Endoribonuclease L-PSP n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46PT0_CUPPJ
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AAZ64854.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubo
13_1_40cm_scaffold_5873_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9839..11629)
DNA (1791bp) protein (597aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQI5_SINAD
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA31175.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
13_1_40cm_scaffold_5873_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12092)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Desulfovibrio sp. X2 RepID=S7TT78_9DELT
endoribonuclease L-PSP; K07567 TdcF protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
endoribonuclease L-PSP
13_1_40cm_scaffold_5873_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12277..13512
DNA (1236bp) protein (412aa)
yqjV-like MFS-type transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=1735155 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily protein
13_1_40cm_scaffold_5873_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13509..14495)
DNA (987bp) protein (329aa)
Putative uncharacterized protein id=3995087 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_5873_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14512..15129
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=4695034 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_APKG5H11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_5873_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15353..16282)
DNA (930bp) protein (310aa)
Dihydrodipicolinate synthetase id=4141953 bin=GWA2_Methylomirabilis_73_35 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydrodipicolinate synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydrodipicolinate synthetase family protein
13_1_40cm_scaffold_5873_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16363..16686)
DNA (324bp) protein (108aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Antibiotic biosynthesis monooxygenase domain-containing protein id=3139743 bin=GWF2_Methylomirabilis_70_14 species=Gordonia polyisoprenivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase
13_1_40cm_scaffold_5873_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16838..18442
DNA (1605bp) protein (535aa)
4-coumarate--CoA ligase (EC:6.2.1.12) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
13_1_40cm_scaffold_5873_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18439..19254
DNA (816bp) protein (272aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein id=14627593 bin=bin7_NC10_sister species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
13_1_40cm_scaffold_5873_24
unknown

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comp(19308..19433)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 24 items

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