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13_1_40cm_scaffold_5933

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5933_1
unknown

Not on your lists

comp(1..63)
-----------------
DNA (63bp)
protein (21aa)

This feature has no annotations

13_1_40cm_scaffold_5933_2

Not on your lists

comp(76..1089)
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q706Q9_PSEPU
Marine sediment metagenome DNA, contig: S01H4_S15006 {ECO:0000313|EMBL:GAH14577.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_scaffold_5933_3
unknown

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comp(1240..1617)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

13_1_40cm_scaffold_5933_4
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1651..3105)
-----------------
DNA (1455bp)
protein (485aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BX05_9FLAO
subtilisin-like serine protease
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EHQ01957.1}; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gi
13_1_40cm_scaffold_5933_5

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comp(3117..4139)
-----------------
DNA (1023bp)
protein (341aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037CC290
Fibronectin type III domain protein {ECO:0000313|EMBL:KKS92046.1}; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
VCBS repeat-containing protein
13_1_40cm_scaffold_5933_6
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(4126..4716)
-----------------
DNA (591bp)
protein (197aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAL58743.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
fibronectin type III domain-containing protein
13_1_40cm_scaffold_5933_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4866..5870)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FIP9_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO75396.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_scaffold_5933_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6051..7634)
-----------------
DNA (1584bp)
protein (528aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000371CF4D
beta-propeller repeat-containing to-pal system protein TolB Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40-like beta Propeller containing protein
13_1_40cm_scaffold_5933_9
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(7646..8998)
-----------------
DNA (1353bp)
protein (451aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
tolB protein; K03641 TolB protein Tax=RBG_13_Chloroflexi_50_21_curated
WD-40-like beta propeller repeat-containing protein
13_1_40cm_scaffold_5933_10
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

comp(9022..10296)
-----------------
DNA (1275bp)
protein (425aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
chromosome condensation regulator RCC1
regulator of chromosome condensation RCC1 Tax=GWF2_Melainabacteria_32_7_curated
13_1_40cm_scaffold_5933_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10369..11589)
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035D2938
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
tolB protein
13_1_40cm_scaffold_5933_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11626..13824)
-----------------
DNA (2199bp)
protein (733aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
regulator of chromosome condensation, RCC1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulator of chromosome condensation RCC1
13_1_40cm_scaffold_5933_13
unknown

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14008..14808
-----------------
DNA (801bp)
protein (267aa)

This feature has no annotations

13_1_40cm_scaffold_5933_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15050..17641)
-----------------
DNA (2592bp)
protein (864aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG93864.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
chromosome condensation regulator RCC1
13_1_40cm_scaffold_5933_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17638..19080)
-----------------
DNA (1443bp)
protein (481aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TPR repeat-containing protein id=4790530 bin=GWC2_Methylomirabilis_70_16 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_5933_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19095..20771)
-----------------
DNA (1677bp)
protein (559aa)
Tetratricopeptide repeat domain protein (Fragment) n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W5B4_9CYAN id=5225754 bin=16ft_combo_ws3_JS1 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_5933_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20768..21415)
-----------------
DNA (648bp)
protein (216aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_5933_18
unknown

Not on your lists

comp(21488..22261)
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

13_1_40cm_scaffold_5933_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22361..22624)
-----------------
DNA (264bp)
protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_5933_20
unknown

Not on your lists

comp(22767..22988)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_5933_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22972..25008)
-----------------
DNA (2037bp)
protein (679aa)
carbon starvation protein A n=1 Tax=Brevibacillus sp. phR RepID=UPI0002EF4965
cstA; carbon starvation protein A; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbon starvation protein CstA
13_1_40cm_scaffold_5933_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25037..25672
-----------------
DNA (636bp)
protein (212aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-(Acyl-carrier protein) reductase n=2 Tax=Geobacillus RepID=A4IM65_GEOTN
fabG; 3-ketoacyl-ACP reductase
13_1_40cm_scaffold_5933_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25752..26309
-----------------
DNA (558bp)
protein (186aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 23 items

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