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13_1_40cm_scaffold_595

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_595_1
CG_Cyano_01, Cyanobacteria, Bacteria

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1..2520
DNA (2520bp) protein (840aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX5_9GAMM
glycine dehydrogenase Tax=CG_Cyano_01
13_1_40cm_scaffold_595_2
unknown

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comp(2376..2945)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_scaffold_595_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3240..4835
DNA (1596bp) protein (532aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
13_1_40cm_scaffold_595_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4836..5825
DNA (990bp) protein (330aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BDZ7_CHLPD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, integral membrane subunit
13_1_40cm_scaffold_595_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5822..6748
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPV7_GEOS8
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_595_6
RLO_PLX_64_10, Bacteria

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6745..7767
DNA (1023bp) protein (341aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0W3_9FIRM
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_40cm_scaffold_595_7
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7764..8729
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD0_THEM7
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU51582.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis;
13_1_40cm_scaffold_595_8
unknown

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8726..9121
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_scaffold_595_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9351..9533)
DNA (183bp) protein (61aa)
Di-/tripeptide transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ63_9DELT
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid/peptide transporter
13_1_40cm_scaffold_595_10
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9569..10681)
DNA (1113bp) protein (371aa)
Amino acid/peptide transporter n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC15_HYPSM
dipeptide/tripeptide permease; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
amino acid/peptide transporter
13_1_40cm_scaffold_595_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10692..11087)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF6_RUBXD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_595_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(11092..12099)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein id=4691060 bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_40cm_scaffold_595_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12104..12568)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_595_14
unknown

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12917..13414
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_scaffold_595_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13399..15594
DNA (2196bp) protein (732aa)
hypothetical protein n=2 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A8E3DB
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEN72970.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_1_40cm_scaffold_595_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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15621..16112
DNA (492bp) protein (164aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_595_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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16109..16801
DNA (693bp) protein (231aa)
Predicted glutamine amidotransferases Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted glutamine amidotransferases
13_1_40cm_scaffold_595_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16798..17235
DNA (438bp) protein (146aa)
Fis family transcriptional regulator n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B0E0
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_595_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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17232..19202
DNA (1971bp) protein (657aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase id=4905361 bin=GWA2_Methylomirabilis_73_35 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_595_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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19218..20249
DNA (1032bp) protein (344aa)
Glycosyl transferase group 1 n=1 Tax=Leptonema illini DSM 21528 RepID=H2CKS5_9LEPT
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
glycosyl transferase
13_1_40cm_scaffold_595_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20261..21811
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
glycosyl transferase family 2
13_1_40cm_scaffold_595_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21808..22767
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6D2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_595_23
unknown

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22776..23228
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_scaffold_595_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(23249..23467)
DNA (219bp) protein (73aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_595_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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23511..24311
DNA (801bp) protein (267aa)
Glycine oxidase ThiO n=2 Tax=Paenibacillus RepID=F5LEA3_9BACL
glycine oxidase ThiO Tax=GWC2_Gemmatimonadetes_71_10_curated
glycine oxidase ThiO
Displaying 25 items

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