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13_1_40cm_scaffold_671

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_671_1
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFF4_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL55251.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferr
13_1_40cm_scaffold_671_2
unknown

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comp(673..894)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_671_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1039..2862)
DNA (1824bp) protein (608aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde ferredoxin oxidoreductase id=3789300 bin=GWA2_Methylomirabilis_73_35 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_671_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2859..5840)
DNA (2982bp) protein (994aa)
nrfG; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase id=3789302 bin=GWA2_Methylomirabilis_73_35 species=Danio rerio genus=Danio taxon_order=Cypriniformes taxon_class=Actinopterygii phylum=Chordata tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase catalytic subunit
13_1_40cm_scaffold_671_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5837..7213)
DNA (1377bp) protein (459aa)
Outer membrane assembly lipoprotein YfiO id=3789304 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane assembly lipoprotein YfiO Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_671_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7225..7935
DNA (711bp) protein (237aa)
phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3789308 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_671_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7937..9286
DNA (1350bp) protein (450aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain id=14626262 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
13_1_40cm_scaffold_671_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9289..9729
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3979826 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_671_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9789..10916
DNA (1128bp) protein (376aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14626264 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
13_1_40cm_scaffold_671_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11054..12220
DNA (1167bp) protein (389aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=3979811 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_671_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12224..12958)
DNA (735bp) protein (245aa)
Uncharacterized protein id=3979808 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_671_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12978..13898
DNA (921bp) protein (307aa)
ABC transporter substrate-binding protein
Extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ssuA; sulfonate/nitrate/taurine transport system substrate-binding protein id=14626267 bin=bin7_NC10_sister species=Burkholderia sp. WSM4176 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_671_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13876..14460)
DNA (585bp) protein (195aa)
maf protein; K06287 septum formation protein Tax=GWA2_Rokubacteria_73_35_curated
MAF protein id=3979804 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maf protein
13_1_40cm_scaffold_671_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14555..14821)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979802 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_671_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14835..15755)
DNA (921bp) protein (307aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) id=14626269 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
13_1_40cm_scaffold_671_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15752..16147)
DNA (396bp) protein (132aa)
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S-adenosylmethionine decarboxylase proenzyme id=3979797 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_671_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16564..17439
DNA (876bp) protein (292aa)
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] id=14626272 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
agmatinase (EC:3.5.3.11)
13_1_40cm_scaffold_671_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17418..18170
DNA (753bp) protein (251aa)
Methyltransferase type 11 id=4020054 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase type 11 Tax=GWA2_Rokubacteria_73_35_curated
methyltransferase type 11
13_1_40cm_scaffold_671_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

18170..18712
DNA (543bp) protein (181aa)
acetyltransferase; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HI82_STRA9
acetyltransferase
13_1_40cm_scaffold_671_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18709..19764
DNA (1056bp) protein (352aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative SAM-dependent methyltransferase id=4020053 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PUA domain containing protein
13_1_40cm_scaffold_671_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20004..20900)
DNA (897bp) protein (299aa)
Zn-dependent hydrolases of the beta-lactamase fold protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative Zn-dependent hydrolase of beta-lactamase fold protein id=14625801 bin=bin7_NC10_sister species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying 21 items

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