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13_1_40cm_scaffold_742

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_742_1
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..453
DNA (453bp) protein (151aa)
Membrane protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JCQ0_9BURK
Membrane protein {ECO:0000313|EMBL:ESJ25721.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
transmembrane protein
13_1_40cm_scaffold_742_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

516..1310
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H745_ARTCA
short-chain dehydrogenase/reductase SDR Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_742_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1319..2908)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000315C058
Uncharacterized protein {ECO:0000313|EMBL:KGD86396.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Tannase and feruloyl esterase
13_1_40cm_scaffold_742_4
bacterium YEK0313, Bacteria

Not on your lists

comp(2991..3938)
DNA (948bp) protein (316aa)
gluconolactonase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000375A167
Gluconolactonase {ECO:0000313|EMBL:CEJ13397.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative gluconolactonase
13_1_40cm_scaffold_742_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4134..4928
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U5_9BRAD
enoyl-CoA hydratase/isomerase family protein Tax=RBG_16_Gamma2_60_9_curated
enoyl-CoA hydratase/isomerase family protein
13_1_40cm_scaffold_742_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5087..6259
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003647037
Uncharacterized protein {ECO:0000313|EMBL:ETW95673.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase
13_1_40cm_scaffold_742_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6680..10267)
DNA (3588bp) protein (1196aa)
ABC efflux pump, fused ATPase and inner membrane subunits (EC:3.6.3.27 3.6.3.29)
ABC efflux pump, fused ATPase and inner membrane subunits n=1 Tax=alpha proteobacterium BAL199 RepID=A8TT39_9PROT
ABC transporter {ECO:0000313|EMBL:KGM33751.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.
13_1_40cm_scaffold_742_8
unknown

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comp(10278..10490)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_742_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10630..11538
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2J224_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:EKE68887.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source=
LysR family transcriptional regulator
13_1_40cm_scaffold_742_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11595..13220
DNA (1626bp) protein (542aa)
Hemin-binding lipoprotein id=3428799 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dipeptide ABC transporter substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
dipeptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_742_11
unknown

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13217..13453
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_742_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13507..13647
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04826.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
13_1_40cm_scaffold_742_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

13765..14037
DNA (273bp) protein (91aa)
ribbon-helix-helix protein, copG family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_40cm_scaffold_742_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

14176..14385
DNA (210bp) protein (70aa)
PIN domain protein; K07062 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PIN domain protein id=4779999 bin=GWC2_Deltaproteobacteria_42_51 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
twitching motility protein PilT
13_1_40cm_scaffold_742_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14402..15910)
DNA (1509bp) protein (503aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003796F91
amidohydrolase
13_1_40cm_scaffold_742_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15923..18283)
DNA (2361bp) protein (787aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2) Tax=RBG_16_Betaproteobacteria_64_18_curated
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003670E63
13_1_40cm_scaffold_742_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18342..19331)
DNA (990bp) protein (330aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW98957.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein id=14626329 bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase family protein
13_1_40cm_scaffold_742_18
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19361..20149)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 RepID=V5Q6F3_ZYMMB
Uncharacterized protein {ECO:0000313|EMBL:AAV90600.1}; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source=
hypothetical protein
13_1_40cm_scaffold_742_19
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20548..21264
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GQD0_CUPNN
hypothetical protein; K06889 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein
13_1_40cm_scaffold_742_20
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21261..22340
DNA (1080bp) protein (360aa)
Malate/L-lactate dehydrogenase n=1 Tax=Frankia sp. EUN1f RepID=D3CYF7_9ACTO
Malate/L-lactate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Malate/L-lactate dehydrogenase
13_1_40cm_scaffold_742_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22329..23306)
DNA (978bp) protein (326aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=4849607 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
13_1_40cm_scaffold_742_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23303..24007)
DNA (705bp) protein (235aa)
O-methyltransferase mdmC n=1 Tax=Halomonas boliviensis LC1 RepID=G9EFZ1_9GAMM
O-methyltransferase Tax=RBG_16_Betaproteobacteria_66_20_curated
methyltransferase
13_1_40cm_scaffold_742_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24030..24983
DNA (954bp) protein (318aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14628122 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_742_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25019..26128
DNA (1110bp) protein (370aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8S2_9BURK
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
mandelate racemase/muconate lactonizing protein
13_1_40cm_scaffold_742_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26157..26327)
DNA (171bp) protein (57aa)
Putative uncharacterized protein id=3327080 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_742_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26318..26671)
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=3327080 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
putative oxidoreductase
Displaying 26 items

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