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13_1_40cm_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_78_1
unknown

Not on your lists

comp(788..1345)
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_scaffold_78_2
unknown

Not on your lists

comp(1405..2013)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_scaffold_78_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2097..3185
DNA (1089bp) protein (363aa)
pfkB family carbohydrate kinase (EC:2.7.1.-)
Sugar kinase, ribokinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9G8_9EURY
Sugar kinase, ribokinase {ECO:0000313|EMBL:KCZ73245.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
13_1_40cm_scaffold_78_4
unknown

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comp(2995..3486)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_scaffold_78_5
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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3706..4494
DNA (789bp) protein (263aa)
Beta-lactamase domain protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVW7_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:EFD92632.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
beta-lactamase domain-containing protein
13_1_40cm_scaffold_78_6
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(4569..5177)
DNA (609bp) protein (203aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrob
Superoxide dismutase n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RW25_PYRIL
superoxide dismutase
13_1_40cm_scaffold_78_7
unknown

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5261..5728
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_scaffold_78_8
unknown

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5778..6272
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_scaffold_78_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6329..7729
DNA (1401bp) protein (467aa)
FeS cluster assembly protein SufB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9N0_NITGG
sufB; FeS cluster assembly protein SufB
FeS cluster assembly protein SufB {ECO:0000313|EMBL:AIC15476.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_scaffold_78_10
RBG_16_Archaea_50_20_curated, Archaea

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7779..9200
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003643BBC
sufD; FeS cluster assembly protein sufD Tax=RBG_16_Archaea_50_20_curated
FeS assembly protein SufD
13_1_40cm_scaffold_78_11
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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9263..9526
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037654EE
dioxygenase ferredoxin protein
Dioxygenase ferredoxin protein {ECO:0000313|EMBL:AFS82306.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus s
13_1_40cm_scaffold_78_12
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

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9585..10481
DNA (897bp) protein (299aa)
uncharacterized membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
Putative uncharacterized protein id=4385671 bin=GWA2_OP3_53_43 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
13_1_40cm_scaffold_78_13
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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10518..10877
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TK72_9EURY id=717761 bin=RAAC39 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_scaffold_78_14
unknown

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comp(10884..11084)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_78_15
GWD2_OD1_36_12, Moranbacteria, Parcubacteria, Bacteria

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comp(11212..11598)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH50_METPE
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KKP94604.1}; TaxID=1618703 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_36_12.;
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_scaffold_78_16
unknown

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11780..12370
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_scaffold_78_17
unknown

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12823..12975
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_78_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(13193..14440)
DNA (1248bp) protein (416aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] id=14632100 bin=bin9_gal15 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin9_gal15 organism_group=GAL15
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CSP1_3_Armatimonadetes
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
13_1_40cm_scaffold_78_19
unknown

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14555..15052
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_scaffold_78_20
unknown

Not on your lists

comp(15365..15538)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_78_21
unknown

Not on your lists

16116..17075
DNA (960bp) protein (320aa)

This feature has no annotations

13_1_40cm_scaffold_78_22
unknown

Not on your lists

comp(17281..17652)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_78_23
unknown

Not on your lists

17851..17982
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_scaffold_78_24
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists


18015..19343
DNA (1329bp) protein (443aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=SYD_METKA
aspartyl-tRNA synthetase Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_scaffold_78_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19909..20631)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_78_26
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21404..22858)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRY0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV24546.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
13_1_40cm_scaffold_78_27
unknown

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23454..23669
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_78_28
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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23850..24737
DNA (888bp) protein (296aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT25_METAC
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AAM04058.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_1_40cm_scaffold_78_29

Not on your lists

24797..25297
DNA (501bp) protein (167aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSH1_METIM
Uncharacterized protein {ECO:0000313|EMBL:AKA49207.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
signal transduction protein with CBS domains
13_1_40cm_scaffold_78_30
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(25809..26213)
DNA (405bp) protein (135aa)
Cyclic nucleotide-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRA9_9BACT
cyclic nucleotide-binding regulatory protein Crp; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Tax=RBG_16_KB1_OP1_55_9_curated
putative transcriptional regulator, Crp/Fnr family
Displaying items 1-30 of 45 in total

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