ggKbase home page

13_1_40cm_scaffold_7976

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7976_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


389..748
DNA (360bp) protein (120aa)
50S ribosomal protein L15P n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG7_PYRF1
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Archaea_50_20_curated
rpl15p; 50S ribosomal protein L15P
13_1_40cm_scaffold_7976_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

884..2251
DNA (1368bp) protein (456aa)
Protein translocase subunit SecY n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G8_9ARCH
hypothetical protein; K10956 protein transport protein SEC61 subunit alpha Tax=RBG_16_Archaea_50_20_curated
preprotein translocase subunit SecY
13_1_40cm_scaffold_7976_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2280..2852
DNA (573bp) protein (191aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Archaea_50_20_curated
Adenylate kinase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMF5_ACIS0
archaeal adenylate kinase
13_1_40cm_scaffold_7976_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2849..3400
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SN68_9EURY
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_7976_5
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

3397..3669
DNA (273bp) protein (91aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6V029_9EURY
50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
13_1_40cm_scaffold_7976_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3672..4262
DNA (591bp) protein (197aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_16_Archaea_50_20_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9R0_STAHD
13_1_40cm_scaffold_7976_7
unknown

Not on your lists

comp(4617..4979)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_scaffold_7976_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5050..6033)
DNA (984bp) protein (328aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_7976_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6078..6497
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2QGE2_9BACT
hypothetical protein; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_scaffold_7976_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6472..6867
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP06_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16044.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_7976_11
unknown

Not on your lists

6965..7441
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_scaffold_7976_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8377..8931)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NNZ7_9BACL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycosyltransferase
13_1_40cm_scaffold_7976_13
unknown

Not on your lists

9018..9464
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_scaffold_7976_14
R_OP11_Gottesmanbacteria_49_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9475..9855)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KG15_9GAMM
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_49_10_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_scaffold_7976_15
unknown

Not on your lists

9929..10150
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_7976_16
unknown

Not on your lists

10587..11015
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_scaffold_7976_17

Not on your lists

11155..11751
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZU85_9CREN
Marine sediment metagenome DNA, contig: S01H1_L02345 {ECO:0000313|EMBL:GAF74060.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_scaffold_7976_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11756..12838)
DNA (1083bp) protein (361aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase IV n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSZ3_METHD
nucleotidyltransferase/DNA polymerase involved in DNA repair
13_1_40cm_scaffold_7976_19
unknown

Not on your lists

comp(12842..13213)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_7976_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13326..13799)
DNA (474bp) protein (158aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_7976_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13987..16827
DNA (2841bp) protein (947aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=RBG_13_Bathyarchaeota_46_16b_curated
polA; archaeal DNA polymerase II, large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PU30_METTM
Displaying 21 items

View Taxonomy