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13_1_40cm_scaffold_8315

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8315_1

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comp(2..1348)
DNA (1347bp) protein (449aa)
FeS assembly protein SufD n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B4C178
FeS assembly protein SufD {ECO:0000313|EMBL:AIA11352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
iron ABC transporter permease
13_1_40cm_scaffold_8315_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1367..2140)
DNA (774bp) protein (258aa)
FeS assembly ATPase SufC n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLD6_CHLTF
Iron-regulated ABC transporter ATPase subunit SufC {ECO:0000313|EMBL:CDM64967.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
FeS assembly ATPase SufC
13_1_40cm_scaffold_8315_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2247..3683)
DNA (1437bp) protein (479aa)
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLD5_CHLTF
Iron-regulated ABC transporter membrane component SufB {ECO:0000313|EMBL:CDM64966.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
Iron-regulated ABC transporter membrane component SufB
13_1_40cm_scaffold_8315_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3750..4235)
DNA (486bp) protein (162aa)
Rrf2 family protein (Putative transcriptional regulator) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLD4_CHLTF
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CDM64965.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
putative transcriptional regulator
13_1_40cm_scaffold_8315_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4440..5084)
DNA (645bp) protein (215aa)
TonB family C-terminal domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM65509.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
13_1_40cm_scaffold_8315_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5081..5584)
DNA (504bp) protein (168aa)
TonB family protein {ECO:0000313|EMBL:CDM65509.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_scaffold_8315_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5700..7199)
DNA (1500bp) protein (500aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJH0_CHLTF
cytosine deaminase
13_1_40cm_scaffold_8315_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7246..7665)
DNA (420bp) protein (140aa)
Cytidine deaminase {ECO:0000313|EMBL:CDM65507.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CDM65507.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomo
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX8_SOLUE
13_1_40cm_scaffold_8315_9
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7662..8315)
DNA (654bp) protein (218aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K202_CYAP8
13_1_40cm_scaffold_8315_10
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8264..8971)
DNA (708bp) protein (236aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JNI5_9GAMM
13_1_40cm_scaffold_8315_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8968..9606)
DNA (639bp) protein (213aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=HIS1_MOOTA
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
13_1_40cm_scaffold_8315_12
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9594..10871)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003810577
hisS; histidyl-tRNA synthetase
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriac
13_1_40cm_scaffold_8315_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(11043..11372)
DNA (330bp) protein (110aa)
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein id=24419234 bin=RBG_19FT_COMBO_GAL15_69_19 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
TrpR-related protein YerC/YecD
13_1_40cm_scaffold_8315_14
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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comp(11452..12669)
DNA (1218bp) protein (406aa)
phosphoserine aminotransferase (EC:2.6.1.1 2.6.1.52) id=24404077 bin=RBG_19FT_COMBO_GAL15_69_19 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
class V aminotransferase (EC:2.6.1.-)
class V aminotransferase Tax=RBG_16_Chloroflexi_58_8_curated
13_1_40cm_scaffold_8315_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12910..13584)
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93703.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TIGR02453 family protein id=12557332 bin=CNBR_ACIDO species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_8315_16
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13720..14166)
DNA (447bp) protein (149aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=RIFCSP
Phosphopantothenate/cysteine ligase id=4827531 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
13_1_40cm_scaffold_8315_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(14176..15501)
DNA (1326bp) protein (442aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Armatimonadetes_67_12_curated
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2823248 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
13_1_40cm_scaffold_8315_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(15509..15988)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9KCU5_9DELT id=5225136 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
molybdenum cofactor sulfurase domain containing protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_8315_19
unknown

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comp(16021..16506)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_scaffold_8315_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(16601..17578)
DNA (978bp) protein (326aa)
ExsB family protein; K06864 uncharacterized protein id=14632372 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
ExsB family protein; K06864 uncharacterized protein Tax=CSP1_3_Armatimonadetes
ExsB family protein
13_1_40cm_scaffold_8315_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(17709..18290)
DNA (582bp) protein (194aa)
nitroreductase family protein id=24409829 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nitroreductase family protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nitroreductase
13_1_40cm_scaffold_8315_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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18339..19115
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030F77F5
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 22 items

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