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13_1_40cm_scaffold_8479

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8479_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

299..1219
DNA (921bp) protein (307aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) Tax=GWA2_Rokubacteria_70_23_curated
Long-chain-fatty-acid--CoA ligase id=3021531 bin=GWF2_Methylomirabilis_70_14 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-binding synthetase
13_1_40cm_scaffold_8479_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1367..2671)
DNA (1305bp) protein (435aa)
peptidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase M48, Ste24p id=2413284 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M48 Ste24p
13_1_40cm_scaffold_8479_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2688..3512)
DNA (825bp) protein (275aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2413285 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_8479_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3522..4181)
DNA (660bp) protein (220aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2413286 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_8479_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4178..4648)
DNA (471bp) protein (157aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413287 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_8479_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4632..5180)
DNA (549bp) protein (183aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Peptide deformylase id=4102281 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_8479_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5206..5328)
DNA (123bp) protein (41aa)
protein bugT Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Protein bugT-like protein id=2413339 bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_8479_8
unknown

Not on your lists

5619..5777
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_8479_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6069..7598)
DNA (1530bp) protein (510aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627123 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_8479_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7598..8044)
DNA (447bp) protein (149aa)
Tripartite tricarboxylate transporter TctB family id=2413341 bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tripartite tricarboxylate transporter TctB family Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_8479_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8041..8433)
DNA (393bp) protein (131aa)
putative ring-cleavage extradiol dioxygenase id=14627127 bin=bin7_NC10_sister species=Haloterrigena thermotolerans genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative ring-cleavage extradiol dioxygenase Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_8479_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8430..9242)
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein GobsU_08542 id=2413344 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_8479_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9408..9818)
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2413345 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_8479_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9980..11260)
DNA (1281bp) protein (427aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) Tax=GWA2_Rokubacteria_73_35_curated
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=2413346 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_8479_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11293..11532
DNA (240bp) protein (80aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_8479_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11597..12010)
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413347 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_8479_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12007..12453)
DNA (447bp) protein (149aa)
Uncharacterized protein id=2413348 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_8479_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12597..13922
DNA (1326bp) protein (442aa)
Extracellular solute-binding protein family 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW9_ANADF
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS25865.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
13_1_40cm_scaffold_8479_19
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14030..14878
DNA (849bp) protein (283aa)
ABC transporter permease n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKK3_RALPI
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
ABC transporter permease
13_1_40cm_scaffold_8479_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14879..15730
DNA (852bp) protein (284aa)
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein id=14626254 bin=bin7_NC10_sister species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=CSP1_6_Rokubacteria
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_8479_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15723..16748)
DNA (1026bp) protein (342aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_
Methionine synthase II (Cobalamin-independent) id=2413349 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
13_1_40cm_scaffold_8479_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16887..17426)
DNA (540bp) protein (180aa)
hypothetical protein; K07083 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical conserved protein id=4781405 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative periplasmic solute-binding protein
Displaying 22 items

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