name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_scaffold_852_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(2..799)
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mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWA2_Rokubacteria_73_35_curated
DNA mismatch repair protein MutL id=4555220 bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA mismatch repair protein MutL
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13_1_40cm_scaffold_852_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(837..3470)
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mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutS id=4430853 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutS
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13_1_40cm_scaffold_852_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(3463..3945)
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histidine triad (HIT) protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine triad (HIT) protein id=3360718 bin=GWA2_Methylomirabilis_73_35 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein
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13_1_40cm_scaffold_852_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(3980..4255)
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hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupA1; DNA-binding protein HU 1
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13_1_40cm_scaffold_852_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4538..5458)
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peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] id=14627235 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26)
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13_1_40cm_scaffold_852_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(5427..7145)
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rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S1 id=4941223 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsA; 30S ribosomal protein S1
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13_1_40cm_scaffold_852_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(7168..8526)
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cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytidylate kinase, partial n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4DB15
cytidylate kinase
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13_1_40cm_scaffold_852_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(8532..9845)
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3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=14627231 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
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13_1_40cm_scaffold_852_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(9842..10690)
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prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase family protein id=4143295 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_852_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(10687..11799)
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hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=14627229 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
histidinol-phosphate aminotransferase (EC:2.6.1.9)
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13_1_40cm_scaffold_852_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(11810..12871)
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pheA; chorismate mutase/prephenate dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chorismate mutase/prephenate dehydratase id=3333763 bin=GWA2_Methylomirabilis_73_35 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pheA; chorismate mutase
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13_1_40cm_scaffold_852_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(12941..13513)
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pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pseudouridine synthase id=3333767 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pseudouridine synthase
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13_1_40cm_scaffold_852_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(13620..14225)
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scpB; Segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Segregation and condensation protein B id=3333773 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
scpB; Segregation and condensation protein B
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13_1_40cm_scaffold_852_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(14209..14892)
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segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3333777 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
scpA; chromosome segregation and condensation protein ScpA
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13_1_40cm_scaffold_852_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(14889..15881)
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trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) id=3333940 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_852_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(15881..16657)
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family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase family 2 id=3333943 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
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13_1_40cm_scaffold_852_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(16654..17703)
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ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ADP-heptose:LPS heptosyltransferase id=4143308 bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ADP-heptose--LPS heptosyltransferase
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13_1_40cm_scaffold_852_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(17700..18164)
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cytidyltransferase-related domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytidyltransferase-related domain protein id=3333947 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytidyltransferase-related domain-containing protein
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13_1_40cm_scaffold_852_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(18271..19272)
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D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PfkB domain protein id=3956926 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-beta-D-heptose 7-phosphate kinase
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13_1_40cm_scaffold_852_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19269..19823)
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histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Rok
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase id=3956928 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_852_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19879..20988)
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group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3956931 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
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