ggKbase home page

13_1_40cm_scaffold_990

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_990_1
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..856)
DNA (855bp) protein (285aa)
KpsF/GutQ family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST9_KORVE
KpsF/GutQ family protein
D-arabinose 5-phosphate {ECO:0000313|EMBL:KJZ19352.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S407
13_1_40cm_scaffold_990_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(980..2122)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_1_40cm_scaffold_990_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2187..2957)
DNA (771bp) protein (257aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000255|HAMAP-Rule:MF_00056}; EC=2.5.1.55 {ECO:0000255|HAMAP-Rule:MF_00056};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000255|HAMAP-Ru
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=KDSA_KORVE
2-dehydro-3-deoxyphosphooctonate aldolase
13_1_40cm_scaffold_990_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3127..4800)
DNA (1674bp) protein (558aa)
CTP synthase {ECO:0000255|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000255|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000255|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000255|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PYRG_KORVE
pyrG; CTP synthetase
13_1_40cm_scaffold_990_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5210..5461
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AC55B
AbrB family transcriptional regulator {ECO:0000313|EMBL:KIJ77732.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB5
AbrB family transcriptional regulator
13_1_40cm_scaffold_990_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5454..5840
DNA (387bp) protein (129aa)
PilT protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHH8_KORVE
twitching motility protein PilT
PilT protein-like protein {ECO:0000313|EMBL:ABF43672.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
13_1_40cm_scaffold_990_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5851..6915
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKE1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42659.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_scaffold_990_8
unknown

Not on your lists

7140..7709
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_scaffold_990_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7723..9168)
DNA (1446bp) protein (482aa)
Putative aromatic amino acid decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I796_CALAS
putative aromatic amino acid decarboxylase Tax=RBG_16_Chloroflexi_57_11_curated
putative aromatic amino acid decarboxylase
13_1_40cm_scaffold_990_10
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9288..10052)
DNA (765bp) protein (255aa)
Methyltransferase type 11 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG5_9BACT
methylase Tax=RBG_16_Chloroflexi_57_11_curated
methylase
13_1_40cm_scaffold_990_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10213..10692
DNA (480bp) protein (160aa)
Putative alkyl hydroperoxide reductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N239_ANATU
putative alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative alkyl hydroperoxide reductase
13_1_40cm_scaffold_990_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10837..12147
DNA (1311bp) protein (437aa)
glutamate carboxypeptidase II (EC:3.4.17.21)
Glutamate carboxypeptidase II {ECO:0000313|EMBL:ADV82571.1}; EC=3.4.17.21 {ECO:0000313|EMBL:ADV82571.1};; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacte
Glutamate carboxypeptidase II n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4U3_TERSS
13_1_40cm_scaffold_990_13
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12144..12947
DNA (804bp) protein (268aa)
glutamate carboxypeptidase II (EC:3.4.17.21)
Glutamate carboxypeptidase II {ECO:0000313|EMBL:ADW68317.1}; EC=3.4.17.21 {ECO:0000313|EMBL:ADW68317.1};; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
glutamate carboxypeptidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6A140
13_1_40cm_scaffold_990_14
unknown

Not on your lists

13291..14409
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_40cm_scaffold_990_15
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14424..15881)
DNA (1458bp) protein (486aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F371_ACIC5
thiC; thiamine biosynthesis protein ThiC
13_1_40cm_scaffold_990_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16091..18127
DNA (2037bp) protein (679aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:ABJ82808.1}; EC=3.4.24.71 {ECO:0000313|EMBL:ABJ82808.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterale
Endothelin-converting enzyme 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027J9_SOLUE
13_1_40cm_scaffold_990_17
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18262..18591)
DNA (330bp) protein (110aa)
hypothetical protein
Uncharacterized protein Tax=GWB2_Ignavibacteria_35_6b_curated
Uncharacterized protein id=1804880 bin=GWB2_Desulfobacterales_56_26 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_scaffold_990_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18862..19353
DNA (492bp) protein (164aa)
Cytochrome c-type biogenesis protein, CcmE-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP94_KORVE
cytochrome c-type biogenesis protein, CcmE-like
Cytochrome c-type biogenesis protein, CcmE-like protein {ECO:0000313|EMBL:ABF41306.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
13_1_40cm_scaffold_990_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19571..20011
DNA (441bp) protein (147aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP95_KORVE
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF41305.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_scaffold_990_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19959..20210
DNA (252bp) protein (84aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP95_KORVE
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF41305.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_scaffold_990_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20207..20884
DNA (678bp) protein (226aa)
Cytochrome c-type biogenesis protein CcmB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP96_KORVE
cytochrome c-type biogenesis protein CcmB
Cytochrome c-type biogenesis protein CcmB {ECO:0000313|EMBL:ABF41304.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_1_40cm_scaffold_990_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20881..21570
DNA (690bp) protein (230aa)
Cytochrome c assembly protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP97_KORVE
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ABF41303.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_scaffold_990_23
unknown

Not on your lists

21567..21683
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_scaffold_990_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21777..22106)
DNA (330bp) protein (110aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ24_KORVE
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF43126.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_40cm_scaffold_990_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23019..23747
DNA (729bp) protein (243aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14431129 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cell surface glycoprotein
Displaying 25 items

View Taxonomy