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13_1_40cm_scaffold_1046

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1046_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1..255
DNA (255bp) protein (85aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Fis family transcriptional regulator id=12555999 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1046_2
unknown

Not on your lists

comp(534..1220)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_scaffold_1046_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1280..1972
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037C2924
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_scaffold_1046_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2202..3749
DNA (1548bp) protein (516aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ16_KORVE
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_1046_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3753..4235
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_scaffold_1046_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

4242..5411
DNA (1170bp) protein (390aa)
Cellulose biosynthesis (CelD)-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
cellulose biosynthesis (CelD)-like protein
13_1_40cm_scaffold_1046_7
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

6138..6698
DNA (561bp) protein (187aa)
Similar to transcription antitermination protein NusG n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q029_9BACT
NusG antitermination factor Tax=RBG_13_Nitrospirae_41_22_curated
transcription antitermination protein
13_1_40cm_scaffold_1046_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6747..7919
DNA (1173bp) protein (391aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_1046_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7916..8596
DNA (681bp) protein (227aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZE95_TERRK
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
periplasmic protein involved in polysaccharide export
13_1_40cm_scaffold_1046_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8606..10246
DNA (1641bp) protein (547aa)
Chain length determinant protein, Wzz-like protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVT5_SYNAS
chain length determinant protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
chain length determinant protein
13_1_40cm_scaffold_1046_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10541..11260
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0A6_CORCM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ywqD; putative protein-tyrosine kinase
13_1_40cm_scaffold_1046_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11383..12648
DNA (1266bp) protein (422aa)
Bacterial sugar transferase domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A8Q9_9ZZZZ
sugar transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_1046_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12645..13160
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_1046_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13126..13923
DNA (798bp) protein (266aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
O-antigen polymerase
wzy family polymerase id=12557456 bin=CNBR_ACIDO species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_1046_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13920..15176
DNA (1257bp) protein (419aa)
group 1 glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase group 1 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EDR9_9FIRM
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_1046_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15170..16318
DNA (1149bp) protein (383aa)
Cellulose biosynthesis (CelD)-like protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI87_9DELT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cellulose biosynthesis (CelD)-like protein
13_1_40cm_scaffold_1046_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

16306..17481
DNA (1176bp) protein (392aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGC4_9DELT
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_40cm_scaffold_1046_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

17478..18665
DNA (1188bp) protein (396aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Protein involved in cellulose biosynthesis (CelD) id=14630699 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_1046_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18655..19755
DNA (1101bp) protein (367aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHT3_ANASK
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
polysaccharide deacetylase
13_1_40cm_scaffold_1046_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19713..21224
DNA (1512bp) protein (504aa)
Polysaccharide biosynthesis protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UI03_ANASK
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
polysaccharide biosynthesis protein
13_1_40cm_scaffold_1046_21

Not on your lists

comp(21332..22693)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YNP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD38667.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_1046_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

23718..25046
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F32C9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
Displaying 22 items

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