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13_1_40cm_scaffold_1048

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1048_1
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3..1574
DNA (1572bp) protein (524aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus sanguinis SK115 RepID=F0I8I2_STRSA
Cell wall surface anchor family protein {ECO:0000313|EMBL:EGD32017.1}; TaxID=888810 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sa
Cna B domain-containing protein
13_1_40cm_scaffold_1048_2
unknown

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1754..2677
DNA (924bp) protein (308aa)

This feature has no annotations

13_1_40cm_scaffold_1048_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2789..3400
DNA (612bp) protein (204aa)
Protein containing Transcriptional regulator PadR n=1 Tax=mine drainage metagenome RepID=T1BHS7_9ZZZZ
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Transcriptional regulator, PadR family
13_1_40cm_scaffold_1048_4
unknown

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3610..5118
DNA (1509bp) protein (503aa)

This feature has no annotations

13_1_40cm_scaffold_1048_5
unknown

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5212..5727
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_scaffold_1048_6
unknown

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5956..6462
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_scaffold_1048_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7103..7390)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_1048_8
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(7455..8699)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000371BA43
Family 2 glycosyl transferase {ECO:0000313|EMBL:EWG07444.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;
family 2 glycosyl transferase
13_1_40cm_scaffold_1048_9
unknown

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8771..9241
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_scaffold_1048_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(9396..9884)
DNA (489bp) protein (163aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1048_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(9891..10844)
DNA (954bp) protein (318aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_40cm_scaffold_1048_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(11374..11637)
DNA (264bp) protein (88aa)
30S ribosomal protein S19P n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QD56_METFO
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Archaea_50_20_curated
SSU ribosomal protein S19P
13_1_40cm_scaffold_1048_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(11839..12564)
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=RL2_STAMF
rpl2p; 50S ribosomal protein L2P; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Archaea_50_20_curated
rpl2p; 50S ribosomal protein L2
13_1_40cm_scaffold_1048_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12582..12863)
DNA (282bp) protein (94aa)
50S ribosomal protein L23P n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJY5_PYRSN
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L23
13_1_40cm_scaffold_1048_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(12857..13462)
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=5 Tax=Sulfolobus islandicus RepID=RL4_SULIA
50S ribosomal protein L4a; K02930 large subunit ribosomal protein L4e Tax=RBG_16_Archaea_50_20_curated
rpl4lp; 50S ribosomal protein L4P
13_1_40cm_scaffold_1048_16

Not on your lists


comp(13638..14642)
DNA (1005bp) protein (335aa)
50S ribosomal protein L3 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE66_ARCPA
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" so
50S ribosomal protein L3
13_1_40cm_scaffold_1048_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14643..15497)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECE5_PYRF1
hypothetical protein; K09142 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_1048_18
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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15572..16609
DNA (1038bp) protein (346aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Y2_9EURY
Tax=BJP_IG2158_Thermoplasmatales_53_16
13_1_40cm_scaffold_1048_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16635..18107)
DNA (1473bp) protein (491aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA-splicing ligase RtcB n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCV4_9CREN
RNA-2',3'-PO4:RNA-5'-OH ligase
13_1_40cm_scaffold_1048_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18213..18662)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI000362E865
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_1048_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(19442..20158)
DNA (717bp) protein (239aa)
3-hydroxyacyl-CoA dehydrogenase (Hbd-5) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29143_ARCFU
hbd-5; 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase (Hbd-5) {ECO:0000313|EMBL:AAB90118.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeogl
13_1_40cm_scaffold_1048_22
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

20447..21154
DNA (708bp) protein (236aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
hypothetical protein
13_1_40cm_scaffold_1048_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(21209..21496)
DNA (288bp) protein (96aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_13_Bathyarchaeota_38_9_curated
nucleic acid binding OB-fold tRNA/helicase-type id=18248164 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
OB-fold nucleic acid binding protein
13_1_40cm_scaffold_1048_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21493..21939)
DNA (447bp) protein (149aa)
Deoxyribonuclease/rho motif-related TRAM domain containing protein
Deoxyribonuclease/rho motif-related TRAM domain containing protein {ECO:0000313|EMBL:AIC14554.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
deoxyribonuclease/rho motif-related TRAM id=18248961 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
13_1_40cm_scaffold_1048_25
RBG_16_Archaea_50_20_curated, Archaea

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22229..24679
DNA (2451bp) protein (817aa)
valS; valine--tRNA ligase (EC:6.1.1.9) Tax=RBG_16_Archaea_50_20_curated
valS; valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF88_NITGG
13_1_40cm_scaffold_1048_26
RBG_16_Archaea_50_20_curated, Archaea

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comp(24708..25118)
DNA (411bp) protein (137aa)
Abortive infection protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART7_9ARCH
CAAX protease self-immunity
abortive infection protein Tax=RBG_16_Archaea_50_20_curated
Displaying 26 items

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