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13_1_40cm_scaffold_1053

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1053_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..348)
DNA (348bp) protein (116aa)
enoyl-CoA hydratase id=3732190 bin=GWA2_Methylomirabilis_73_35 species=Sphingobium yanoikuyae genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase Tax=GWA2_Rokubacteria_73_35_curated
enoyl-CoA hydratase
13_1_40cm_scaffold_1053_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(410..685)
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_1053_3
unknown

Not on your lists

865..1038
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_1053_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1089..1637
DNA (549bp) protein (183aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWA2_Rokubacteria_73_35_curated
Carboxymethylenebutenolidase id=2312841 bin=GWA2_Methylomirabilis_73_35 species=Beijerinckia indica genus=Beijerinckia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxymethylenebutenolidase
13_1_40cm_scaffold_1053_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

1650..2090
DNA (441bp) protein (147aa)
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Large-conductance mechanosensitive channel id=2151374 bin=GWB2_Elusimicrobium_63_22 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
Large-conductance mechanosensitive channel
13_1_40cm_scaffold_1053_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2140..3102
DNA (963bp) protein (321aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase domain-containing protein
13_1_40cm_scaffold_1053_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3114..4322
DNA (1209bp) protein (403aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Major facilitator superfamily MFS_1 id=2312823 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multidrug-efflux transporter
13_1_40cm_scaffold_1053_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4335..6170)
DNA (1836bp) protein (612aa)
acyl-CoA synthetase/AMP-acid ligase (EC:6.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acyl-CoA synthetase/AMP-acid ligase (EC:6.2.1.17)
Acetate--CoA ligase n=1 Tax=Thiocapsa marina 5811 RepID=F9U6J8_9GAMM
13_1_40cm_scaffold_1053_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6411..8108
DNA (1698bp) protein (566aa)
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP26_KORVE
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:ABF41374.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candid
13_1_40cm_scaffold_1053_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8110..8748
DNA (639bp) protein (213aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] id=14627064 bin=bin7_NC10_sister species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
siroheme synthase
13_1_40cm_scaffold_1053_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8736..9536
DNA (801bp) protein (267aa)
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=GWA2_Rokubacteria
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase id=4894276 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1053_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9533..10507
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA00_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39598.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_1053_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10587..10727
DNA (141bp) protein (47aa)
peroxidase (EC:1.11.1.7) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative peroxidase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJD6_9SPHN
peroxidase
13_1_40cm_scaffold_1053_14
unknown

Not on your lists

comp(10827..10952)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_1053_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11216..12799
DNA (1584bp) protein (528aa)
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AMP-dependent synthetase and ligase id=2312813 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_1053_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12800..13810
DNA (1011bp) protein (337aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS13_PARL1
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase family protein
13_1_40cm_scaffold_1053_17
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13807..14928
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFP6_9BRAD
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46459.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
NHL repeat containing protein
13_1_40cm_scaffold_1053_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14925..15377
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FA32AF
2Fe-2S iron-sulfur cluster binding domain-containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
(2Fe-2S)-binding domain-containing protein
13_1_40cm_scaffold_1053_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15374..17572
DNA (2199bp) protein (733aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase (EC:1.3.99.16) Tax=RBG_16_Betaproteobacteria_64_18_curated
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase (EC:1.3.99.16)
isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000346AF50
13_1_40cm_scaffold_1053_20
unknown

Not on your lists

17592..17939
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_scaffold_1053_21
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

17944..18636
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI000315EA7E
Uncharacterized protein {ECO:0000313|EMBL:KIY13339.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
13_1_40cm_scaffold_1053_22
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18653..19072)
DNA (420bp) protein (140aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WZP0_MYCKA
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:AGZ54584.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii AT
13_1_40cm_scaffold_1053_23
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19092..20282)
DNA (1191bp) protein (397aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=RBG_16_Chloroflexi_68_14_curated
cytochrome P450 (EC:1.14.-.-)
Biotin biosynthesis cytochrome P450 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKT4_9CHLR
13_1_40cm_scaffold_1053_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20285..21145)
DNA (861bp) protein (287aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=GWA2_Rokubacteria_73_35_curated
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase id=2213480 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1053_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21142..21885)
DNA (744bp) protein (248aa)
SCO1/SenC family protein/methylamine utilization protein MauG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCO1/SenC family protein/methylamine utilization protein MauG id=12498377 bin=THIO_MID species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
13_1_40cm_scaffold_1053_26
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21854..23176)
DNA (1323bp) protein (441aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT91_9BURK
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:EHR68964.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales
Selenium-binding protein, putative
13_1_40cm_scaffold_1053_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23205..24500)
DNA (1296bp) protein (432aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Leptospira weilii serovar Ranarum str. ICFT RepID=N1WI19_9LEPT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Displaying 27 items

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