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13_1_40cm_scaffold_10613

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10613_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..648)
DNA (648bp) protein (216aa)
acyl-CoA synthetase/AMP-acid ligase (EC:6.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative propionyl-CoA synthetase (EC:6.2.1.17)
Acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases id=2213450 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_10613_2
unknown

Not on your lists

894..1322
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_scaffold_10613_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1387..2166)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHQ4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS28250.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_10613_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(2163..2639)
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIM8_9BACT
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBE69385.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfer
13_1_40cm_scaffold_10613_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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2936..3451
DNA (516bp) protein (172aa)
Putative uncharacterized protein id=3184992 bin=GWF2_Lentisphaerae_52_8 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein; K09924 hypothetical protein Tax=GWF2_Lentisphaerae_52_8_curated
hypothetical protein
13_1_40cm_scaffold_10613_6
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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3497..4975
DNA (1479bp) protein (493aa)
Beta-lactamase id=8266027 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
beta-lactamase Tax=RBG_13_Aminicenantes_62_12_curated
beta-lactamase
13_1_40cm_scaffold_10613_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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5008..5229
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C77F0
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
13_1_40cm_scaffold_10613_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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5412..5972
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=24599981 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_scaffold_10613_9
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6182..6946
DNA (765bp) protein (255aa)
Alr3897 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQD6_NOSS1
hypothetical protein
Alr3897 protein {ECO:0000313|EMBL:BAB75596.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_1_40cm_scaffold_10613_10
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6912..8000)
DNA (1089bp) protein (363aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rheinheimera sp. A13L RepID=F7NSW8_9GAMM
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EGM78997.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" sour
beta-lactamase
13_1_40cm_scaffold_10613_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8002..8463)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_10613_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8421..10655)
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000373B24D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2911
13_1_40cm_scaffold_10613_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10672..11121)
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_10613_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11124..11822)
DNA (699bp) protein (233aa)
aldo/keto reductase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B37B34
Uncharacterized protein {ECO:0000313|EMBL:ETX07644.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
aldo/keto reductase
13_1_40cm_scaffold_10613_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11994..13766)
DNA (1773bp) protein (591aa)
hypothetical protein; K06888 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_10613_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13923..15092)
DNA (1170bp) protein (390aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_10613_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15145..15831)
DNA (687bp) protein (229aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN5_RUBXD
13_1_40cm_scaffold_10613_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15831..17444)
DNA (1614bp) protein (538aa)
DNA polymerase X family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R8_GEMAT
DNA polymerase X family protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PHP domain protein
13_1_40cm_scaffold_10613_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17546..18199)
DNA (654bp) protein (218aa)
putative hydrolase; K01259 proline iminopeptidase [EC:3.4.11.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
13_1_40cm_scaffold_10613_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18372..20138
DNA (1767bp) protein (589aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter inner membrane subunit
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_scaffold_10613_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20135..20590
DNA (456bp) protein (152aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
ATP-binding protein of ABC transporter system
Displaying 21 items

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