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13_1_40cm_scaffold_1079

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1079_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_scaffold_1079_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(107..1585)
DNA (1479bp) protein (493aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
13_1_40cm_scaffold_1079_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1600..2556)
DNA (957bp) protein (319aa)
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1079_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2578..3225)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CZE8_DEIDV
beta-lactamase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_scaffold_1079_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3222..4193)
DNA (972bp) protein (324aa)
trxB1; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
trxB; thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Sporolactobacillus vineae RepID=UPI000287D224
13_1_40cm_scaffold_1079_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4190..4489)
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1079_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4548..5297)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_1079_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5309..6040)
DNA (732bp) protein (244aa)
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG91128.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Short-chain dehydrogenase/reductase SDR id=4830673 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1079_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6040..6765)
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured gamma proteobacterium RepID=H5SE57_9GAMM
fabG10; 3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_1079_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6755..7030)
DNA (276bp) protein (92aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Peroxiredoxin n=1 Tax=Brevibacillus sp. BC25 RepID=J2ZSM8_9BACL
bacterioferritin comigratory protein
13_1_40cm_scaffold_1079_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7049..7192)
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_1079_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7164..7991)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K7_GEMAT
hypothetical protein; K07053 Tax=RBG_16_Gemmatimonadetes_66_8_curated
PHP domain protein
13_1_40cm_scaffold_1079_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8029..8298)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A956_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1079_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8306..8620)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_40cm_scaffold_1079_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8623..9969)
DNA (1347bp) protein (449aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
Dihydrolipoamide acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_40cm_scaffold_1079_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10048..11028)
DNA (981bp) protein (327aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Transketolase central region
13_1_40cm_scaffold_1079_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11028..12008)
DNA (981bp) protein (327aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Similar to pyruvate dehydrogenase (Lipoamide) E1 component alpha chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLE9_9BACT
dehydrogenase E1 component
13_1_40cm_scaffold_1079_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12040..12255
DNA (216bp) protein (72aa)
Mercuric reductase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM30_9GAMM
putative mercuric ion binding protein; K07213 copper chaperone Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mercuric reductase
13_1_40cm_scaffold_1079_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12252..12542)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A960_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1079_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12520..15123)
DNA (2604bp) protein (868aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Heavy metal translocating P-type ATPase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3E7_DEIGD
heavy metal translocating P-type ATPase
13_1_40cm_scaffold_1079_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(15116..15553)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037D8AF9
Cupredoxin-like domain {ECO:0000313|EMBL:CDM64284.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
copper-exporting ATPase
13_1_40cm_scaffold_1079_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(15550..17976)
DNA (2427bp) protein (809aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=12556588 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hppA; membrane-bound proton-translocating pyrophosphatase
13_1_40cm_scaffold_1079_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18028..18345)
DNA (318bp) protein (106aa)
inositol-3-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=14425941 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
myo-inositol-1-phosphate synthase
Displaying 23 items

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