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13_1_40cm_scaffold_108

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_108_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(459..851)
DNA (393bp) protein (131aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_108_2
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(947..1744)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4Z7N9_PAEAL
amidohydrolase 2 Tax=GWA2_RIF03_38_11_curated
amidohydrolase
13_1_40cm_scaffold_108_3
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1971..2639)
DNA (669bp) protein (223aa)
Putative aminoacrylate hydrolase RutD n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MCB1_9ACTO
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:EPJ37138.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghanie
putative hydrolase or acyltransferase
13_1_40cm_scaffold_108_4

Not on your lists

comp(3345..3986)
DNA (642bp) protein (214aa)
bifunctional deaminase-reductase domain-containing protein id=5085530 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:KKS95262.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011
RibD C-terminal domain
13_1_40cm_scaffold_108_5
unknown

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comp(4047..4298)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_108_6
GWB1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

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4301..4963
DNA (663bp) protein (221aa)
Tax=GWB1_OP11_43_11
13_1_40cm_scaffold_108_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5182..6324)
DNA (1143bp) protein (381aa)
saccharopine dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase id=8266064 bin=CD_OP8_4m species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
saccharopine dehydrogenase
13_1_40cm_scaffold_108_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..6733
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=J3BBL3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ETW95822.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_scaffold_108_9
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(6737..7933)
DNA (1197bp) protein (399aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS4_9BACT
geranylgeranyl reductase Tax=RBG_13_Bathyarchaeota_52_12_curated
geranylgeranyl reductase
13_1_40cm_scaffold_108_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(7942..8454)
DNA (513bp) protein (171aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_1_40cm_scaffold_108_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8719..9282
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=4964974 bin=GWA2_Bacteroidetes_42_15 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
13_1_40cm_scaffold_108_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9360..10499
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA synthetase beta chain n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A048_FERFK
succinyl-CoA synthetase subunit beta
13_1_40cm_scaffold_108_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

10500..11381
DNA (882bp) protein (294aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YD40_AERPE
13_1_40cm_scaffold_108_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(11596..12396)
DNA (801bp) protein (267aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL84_METH6
putative ribosomal RNA small subunit methyltransferase A
13_1_40cm_scaffold_108_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12401..12853)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QUT5_VULDI
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_108_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13136..13465)
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000364BA4E
13_1_40cm_scaffold_108_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13837..14883
DNA (1047bp) protein (349aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA (guanine(10)-N2)-dimethyltransferase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=TMG10_METTH
methyltransferase-like protein
13_1_40cm_scaffold_108_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

14884..15804
DNA (921bp) protein (307aa)
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=uncultured archaeon GZfos26D6 RepID=Q64C36_9ARCH
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_scaffold_108_19
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15829..16113)
DNA (285bp) protein (95aa)
UPF0201 protein VMUT_1750 n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QUW9_VULM7
hypothetical protein
UPF0201 protein Vdis_0900 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distrib
13_1_40cm_scaffold_108_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16239..16796)
DNA (558bp) protein (186aa)
UPF0200 protein Hbut_0338 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=Y338_HYPBU
dephospho-CoA kinase, CoaE Tax=RBG_13_Bathyarchaeota_38_9_curated
dephospho-CoA kinase, CoaE
13_1_40cm_scaffold_108_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16946..17443
DNA (498bp) protein (166aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVM2_METKA
LigT; 2'-5' RNA ligase
13_1_40cm_scaffold_108_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17494..18912
DNA (1419bp) protein (473aa)
tRNA adenylyltransferase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA adenylyltransferase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=24624164 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
tRNA cytidylyltransferase (EC:2.7.7.72)
13_1_40cm_scaffold_108_23

Not on your lists

18891..19664
DNA (774bp) protein (258aa)
Marine sediment metagenome DNA, contig: S01H1_L00574 {ECO:0000313|EMBL:GAF84883.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Ser/Thr protein kinase id=14428117 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative serine/threonine protein kinase
13_1_40cm_scaffold_108_24
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(19674..20516)
DNA (843bp) protein (281aa)
Putative ABC transporter permease protein id=3743282 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_40cm_scaffold_108_25
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(20513..21334)
DNA (822bp) protein (274aa)
ABC transporter n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=Q4LED5_9ARCH
ABC-2 type transport system protein
ABC transporter {ECO:0000313|EMBL:BAE03288.1}; ABC-2 type transport system protein {ECO:0000313|EMBL:BAJ51581.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus
13_1_40cm_scaffold_108_26
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(21321..22325)
DNA (1005bp) protein (335aa)
Antibiotic transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX0_9BACT
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_108_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(22480..25392)
DNA (2913bp) protein (971aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon GZfos24D9 RepID=Q64C96_9ARCH
DEAD/DEAH box helicase
Displaying 27 items

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