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13_1_40cm_scaffold_1131

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1131_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1..396
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=4803140 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_1131_2
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(428..1666)
DNA (1239bp) protein (413aa)
citrate transporter n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003619913
citrate transporter Tax=RIFOXYA2_FULL_RIF01_40_8_curated
Na+/H+ antiporter NhaD-like permease
13_1_40cm_scaffold_1131_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1805..3004
DNA (1200bp) protein (400aa)
Putative lipid-transfer protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AJJ5_9ACTN
putative lipid-transfer protein Tax=GWA2_Rokubacteria_70_23_curated
putative lipid-transfer protein
13_1_40cm_scaffold_1131_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2973..4076)
DNA (1104bp) protein (368aa)
Luciferase-like monooxygenase id=4412867 bin=GWF2_Methylomirabilis_70_14 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_70_23_curated
luciferase family protein
13_1_40cm_scaffold_1131_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4018..5400)
DNA (1383bp) protein (461aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein sce8293 id=2306499 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1131_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5411..6235)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000373EFF4
Uncharacterized protein {ECO:0000313|EMBL:KIJ77619.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SAM-dependent methyltransferase
13_1_40cm_scaffold_1131_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6232..8835)
DNA (2604bp) protein (868aa)
lytic transglycosylase, catalytic; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase id=4793525 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase catalytic subunit
13_1_40cm_scaffold_1131_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8838..11390)
DNA (2553bp) protein (851aa)
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=14625966 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
13_1_40cm_scaffold_1131_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11515..12573
DNA (1059bp) protein (353aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidinol-phosphate aminotransferase id=4429857 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate aminotransferase
13_1_40cm_scaffold_1131_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12636..12947)
DNA (312bp) protein (104aa)
id=14625964 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=14625964 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1131_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12993..13517
DNA (525bp) protein (175aa)
hypothetical protein id=4429854 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_1131_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13514..14563
DNA (1050bp) protein (350aa)
id=4698146 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4698146 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1131_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14629..15510
DNA (882bp) protein (294aa)
peptidase S58, DmpA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-aminopeptidase/D-esterase id=4429850 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S58, DmpA
13_1_40cm_scaffold_1131_14
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

15529..16866
DNA (1338bp) protein (446aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=CG_Arma_02
putative phytochrome sensor protein
13_1_40cm_scaffold_1131_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16863..17606)
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative intramembrane serine protease id=2322384 bin=GWA2_Methylomirabilis_73_35 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhomboid family protein
13_1_40cm_scaffold_1131_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17606..18250)
DNA (645bp) protein (215aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4029904 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1131_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18498..19700)
DNA (1203bp) protein (401aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homogentisate 1,2-dioxygenase id=4840543 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
homogentisate 1,2-dioxygenase
13_1_40cm_scaffold_1131_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19762..20058
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4029901 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1131_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20039..20947)
DNA (909bp) protein (303aa)
aminopeptidase Y (EC:3.4.11.15)
Peptidase id=4029897 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Peptidase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_1131_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21677..22090)
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acT domain-containing protein id=14429420 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
acT domain-containing protein
13_1_40cm_scaffold_1131_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22108..23097)
DNA (990bp) protein (330aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4657183 bin=GWA2_Methylomirabilis_73_35 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1131_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(23094..23381)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4657184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1131_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(23389..24798)
DNA (1410bp) protein (470aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=GWA2_Rokubacteria_73_35_curated
Methionine--tRNA ligase id=4657185 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methionyl-tRNA synthetase
13_1_40cm_scaffold_1131_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25198..26046)
DNA (849bp) protein (283aa)
putative PSP1-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tpl protein id=14626710 bin=bin7_NC10_sister species=Shuttleworthia satelles genus=Shuttleworthia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Stage 0 sporulation protein yaaT
13_1_40cm_scaffold_1131_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26068..26832)
DNA (765bp) protein (255aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=GWA2_Rokubacteria_73_35_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit id=4657188 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1131_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26822..27448)
DNA (627bp) protein (209aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=4657189 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 26 items

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