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13_1_40cm_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_118_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1..1002)
DNA (1002bp) protein (334aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6A4_9ARCH
13_1_40cm_scaffold_118_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1031..1597)
DNA (567bp) protein (189aa)
KH domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR4_METFV
kh domain protein; K06961 ribosomal RNA assembly protein Tax=RBG_16_Archaea_50_20_curated
kh domain-containing protein
13_1_40cm_scaffold_118_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1625..2335)
DNA (711bp) protein (237aa)
putative serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] Tax=RBG_16_Archaea_50_20_curated
Serine/threonine-protein kinase RIO1 (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVD3_9CREN
13_1_40cm_scaffold_118_4

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2687..4513
DNA (1827bp) protein (609aa)
Amino acid transporter n=1 Tax=Sulfolobus islandicus LAL14/1 RepID=M9UGU2_SULIS
Marine sediment metagenome DNA, contig: S01H4_C01307 {ECO:0000313|EMBL:GAG66447.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
amino acid permease-associated protein
13_1_40cm_scaffold_118_5
RBG_16_Archaea_50_20_curated, Archaea

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4559..5095
DNA (537bp) protein (179aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_118_6
unknown

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5262..5552
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_scaffold_118_7

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comp(5524..6387)
DNA (864bp) protein (288aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q7_THERP
Marine sediment metagenome DNA, contig: S01H1_L00726 {ECO:0000313|EMBL:GAF69187.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Ser/Thr protein phosphatase family protein
13_1_40cm_scaffold_118_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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6598..7374
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q8_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM04954.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
13_1_40cm_scaffold_118_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7366..7629)
DNA (264bp) protein (88aa)
Uncharacterized protein family UPF0434/Trm112 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
uncharacterized protein family UPF0434/Trm112
13_1_40cm_scaffold_118_10
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(7756..9114)
DNA (1359bp) protein (453aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KB61_THENN
UDP-N-acetyl-D-glucosamine dehydrogenase
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ACM22257.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain
13_1_40cm_scaffold_118_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(9111..10193)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_scaffold_118_12
unknown

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10365..11753
DNA (1389bp) protein (463aa)

This feature has no annotations

13_1_40cm_scaffold_118_13
unknown

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comp(11717..11974)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_118_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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12038..12691
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI000362A8E6
dehydrogenase Tax=RBG_13_Bathyarchaeota_46_16b_curated
dehydrogenase
13_1_40cm_scaffold_118_15
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12688..13593)
DNA (906bp) protein (302aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RBG_13_Deltaproteobacteria_61_14_curated
2-dehydropantoate 2-reductase n=1 Tax=Jonquetella sp. BV3C21 RepID=U2UZU2_9BACT
2-dehydropantoate 2-reductase
13_1_40cm_scaffold_118_16
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13655..14536)
DNA (882bp) protein (294aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=CG_Desulfarul_01
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0V6_DESRM
13_1_40cm_scaffold_118_17
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(14521..15279)
DNA (759bp) protein (253aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000313|EMBL:ABO07819.1}; EC=6.3.2.1 {ECO:0000313|EMBL:ABO07819.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Pantothenate synthetase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MT52_PYRCJ
13_1_40cm_scaffold_118_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15276..16223)
DNA (948bp) protein (316aa)
Putative GHMP kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase Tax=RBG_13_Bathyarchaeota_46_16b_curated
GHMP kinase
13_1_40cm_scaffold_118_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16319..17353
DNA (1035bp) protein (345aa)
Gcd1.2; nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Archaea_50_20_curated
Glucose-1-phosphate adenylyltransferase n=24 Tax=Mycobacterium abscessus RepID=I6ZC75_MYCAB
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
13_1_40cm_scaffold_118_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

17381..18733
DNA (1353bp) protein (451aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_13_Bathyarchaeota_46_16b_curated
glmM; phosphoglucosamine mutase (EC:5.4.2.-)
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
13_1_40cm_scaffold_118_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19105..19878)
DNA (774bp) protein (258aa)
Marine sediment metagenome DNA, contig: S03H2_S30297 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_118_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19938..20201)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_118_23

Not on your lists

comp(20324..20812)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B8T7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFM14538.1}; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
hypothetical protein
13_1_40cm_scaffold_118_24
unknown

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20848..21249
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_118_25
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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21351..22058
DNA (708bp) protein (236aa)
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MDH4_CALMQ
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_1_40cm_scaffold_118_26
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

22055..23014
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
NAD-dependent epimerase/dehydratase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JM77_9THEM
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_118_27
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

23053..24156
DNA (1104bp) protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
13_1_40cm_scaffold_118_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(24380..24688)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_40cm_scaffold_118_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(25365..26297)
DNA (933bp) protein (311aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
Transcription initiation factor IIB (TFIIB)
13_1_40cm_scaffold_118_30
unknown

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comp(26656..26886)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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