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13_1_40cm_scaffold_12077

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12077_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

186..524
DNA (339bp) protein (113aa)
General stress protein GsiB n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBT9_MYXSD
gsiB; general stress protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
general stress protein GsiB
13_1_40cm_scaffold_12077_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

639..812
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_12077_3
bacterium YEK0313, Bacteria

Not on your lists

856..1128
DNA (273bp) protein (91aa)
GAF modulated transcriptional regulator, LuxR family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5T9_FRADG
Spore germination protein GerE {ECO:0000313|EMBL:CEJ11939.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
GAF modulated LuxR family transcriptional regulator
13_1_40cm_scaffold_12077_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1133..1684)
DNA (552bp) protein (184aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRW9_9FIRM
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metal dependent phosphohydrolase
13_1_40cm_scaffold_12077_5
unknown

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1695..1898
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_12077_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1953..2612
DNA (660bp) protein (220aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATF5_RUBXD
13_1_40cm_scaffold_12077_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2612..3604
DNA (993bp) protein (331aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Ru
bifunctional sulfur carrier protein/thiazole synthase n=1 Tax=Rubrobacter xylanophilus RepID=UPI0000460C8D
bifunctional sulfur carrier protein/thiazole synthase
13_1_40cm_scaffold_12077_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3605..4711
DNA (1107bp) protein (369aa)
goxB; glycine oxidase (EC:1.5.3.-)
Glycine oxidase {ECO:0000313|EMBL:CAN98704.1}; EC=1.5.3.- {ECO:0000313|EMBL:CAN98704.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Glycine oxidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZ29_SORC5
13_1_40cm_scaffold_12077_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4708..4950)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM05_THEM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU50335.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
13_1_40cm_scaffold_12077_10
unknown

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5860..6075
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_12077_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

6152..8236
DNA (2085bp) protein (695aa)
Immunoglobulin I-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRK5_9BACT
hypothetical protein
LamG domain-containing protein jellyroll fold domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_scaffold_12077_12
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8268..8726)
DNA (459bp) protein (153aa)
Transcription activator effector binding n=1 Tax=Frankia sp. CN3 RepID=G6HK91_9ACTO
Transcription activator effector-binding protein {ECO:0000313|EMBL:KJK48169.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevali
transcription activator effector binding protein
13_1_40cm_scaffold_12077_trna_1
unknown

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comp(8765..8838)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_12077_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8959..9204)
DNA (246bp) protein (82aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=1242092 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_scaffold_12077_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9344..10531)
DNA (1188bp) protein (396aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) id=14629386 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
DNA-directed DNA polymerase (EC:2.7.7.7)
13_1_40cm_scaffold_12077_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10543..11673)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7P5_MYXXD
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_40cm_scaffold_12077_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11683..12216)
DNA (534bp) protein (178aa)
LexA family transcriptional repressor; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lexA; LexA repressor; K01356 repressor LexA [EC:3.4.21.88] id=14629382 bin=bin8_Chloro species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
lexA; LexA repressor
13_1_40cm_scaffold_12077_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12261..13022
DNA (762bp) protein (254aa)
transporter n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024848B0
mechanosensitive ion channel protein MscS Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_12077_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13015..13482
DNA (468bp) protein (156aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629383 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_scaffold_12077_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13482..13661
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_12077_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


13662..14105
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036541C0
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L9
13_1_40cm_scaffold_12077_21
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

14109..14537
DNA (429bp) protein (143aa)
AtaP7 protein n=1 Tax=Streptomyces capreolus RepID=Q8RJX2_STRCP
NUDIX domain protein Tax=RBG_16_Armatimonadetes_67_12_curated
NUDIX hydrolase
Displaying 22 items

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