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13_1_40cm_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_126_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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483..983
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035E6CA8
alkyl hydroperoxide reductase
Peroxiredoxin {ECO:0000313|EMBL:EKP94491.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacte
13_1_40cm_scaffold_126_2
unknown

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comp(1038..1277)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_126_3
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

1278..3050
DNA (1773bp) protein (591aa)
deoxyribonuclease IV (EC:3.1.21.2)
Hedgehog/intein hint domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4345523 bin=PER_GWC2_41_7 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
13_1_40cm_scaffold_126_4
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

3051..3746
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=877455 species="
Endonuclease III n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC36_METSL
13_1_40cm_scaffold_126_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3743..4204)
DNA (462bp) protein (154aa)
Histidine triad protein n=2 Tax=Crenarchaeota RepID=H5SVY5_9CREN
putative histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
histidine triad (HIT) protein
13_1_40cm_scaffold_126_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4188..4730)
DNA (543bp) protein (181aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
13_1_40cm_scaffold_126_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4849..5850
DNA (1002bp) protein (334aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
radical SAM protein id=14428084 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
radical SAM protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_scaffold_126_8

Not on your lists

6302..7480
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase (ACADM, acd) {ECO:0000313|EMBL:AIF00349.1}; EC=1.3.8.7 {ECO:0000313|EMBL:AIF00349.1};; TaxID=1456000 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036C819F
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_126_9
unknown

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7640..8524
DNA (885bp) protein (295aa)

This feature has no annotations

13_1_40cm_scaffold_126_10
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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8576..9373
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T843_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_scaffold_126_11
unknown

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9526..9951
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_scaffold_126_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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10000..10443
DNA (444bp) protein (148aa)
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Nudix 7..137 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_scaffold_126_13
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10469..11404)
DNA (936bp) protein (312aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL35_METAC
alkA; DNA-3-methyladenine glycosylase II
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AAM06578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_1_40cm_scaffold_126_14
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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11532..12290
DNA (759bp) protein (253aa)
Methyltransferase type 11 domain protein n=1 Tax=mine drainage metagenome RepID=T1ANA4_9ZZZZ
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Euryarchaeota_62_10_curated
type 11 methyltransferase
13_1_40cm_scaffold_126_15
archaeon Loki, Lokiarchaeota, Archaea

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comp(12507..13442)
DNA (936bp) protein (312aa)
Putative Aldo/keto reductase family protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141K23 RepID=B3T5Q4_9ZZZZ
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KKK45160.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
aldo/keto reductase
13_1_40cm_scaffold_126_16
unknown

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comp(14782..15309)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_scaffold_126_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15566..15919
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BB8_METBF
Transcriptional regulator, HxlR family
Uncharacterized protein {ECO:0000313|EMBL:AAZ70824.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ba
13_1_40cm_scaffold_126_18

Not on your lists

comp(15921..17522)
DNA (1602bp) protein (534aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=1250805 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein {ECO:0000313|EMBL:EQB63668.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_1_40cm_scaffold_126_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17519..18007)
DNA (489bp) protein (163aa)
ADP-ribose pyrophosphatase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLU2_ACIS0
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
ADP-ribose pyrophosphatase
13_1_40cm_scaffold_126_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18021..18371)
DNA (351bp) protein (117aa)
Nascent polypeptide-associated complex protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T6K7_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
alpha-NAC-like protein
13_1_40cm_scaffold_126_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18418..18903)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEJ9_9ARCH
PUA domain containing protein; K07398 conserved protein with predicted RNA binding PUA domain Tax=RBG_16_Bathyarchaeota_48_13_curated
archaeosine tRNA-ribosyltransferase
13_1_40cm_scaffold_126_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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18977..19480
DNA (504bp) protein (168aa)
XRE family transcriptional regulator n=1 Tax=Methanobrevibacter smithii RepID=UPI00037B6B23
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor ( MBF1 related)
13_1_40cm_scaffold_126_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(19496..19936)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ9_KORVE
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AHG92523.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_126_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19987..20658
DNA (672bp) protein (224aa)
ankyrin Tax=RBG_16_Euryarchaeota_68_12_curated
ankyrin
Putative ankyrin id=1732030 bin=GWB2_Chloroflexi_54_36 species=Deinococcus deserti genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_1_40cm_scaffold_126_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(20814..21599)
DNA (786bp) protein (262aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=RBG_16_Archaea_50_20_curated
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GDG1_METPE
hypothetical protein
13_1_40cm_scaffold_126_26
unknown

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22163..22384
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_126_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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22552..23022
DNA (471bp) protein (157aa)
Transcription factor E n=2 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=TFE_METM5
transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription initiation factor E subunit alpha
13_1_40cm_scaffold_126_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

23041..23811
DNA (771bp) protein (257aa)
Putative uncharacterized protein PH0618 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58352_PYRHO
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_scaffold_126_29
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(23827..25002)
DNA (1176bp) protein (392aa)
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:ABO07643.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ABO07643.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Formyl-CoA transferase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MSM6_PYRCJ
13_1_40cm_scaffold_126_30
unknown

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25039..25614
DNA (576bp) protein (192aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

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