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13_1_40cm_scaffold_12820

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12820_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(127..1794)
DNA (1668bp) protein (556aa)
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXB6_PIRSD
13_1_40cm_scaffold_12820_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1791..2981)
DNA (1191bp) protein (397aa)
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
phospho-2-dehydro-3-deoxyheptonate aldolase id=12557051 bin=CNBR_ACIDO species=Gracilimonas tropica genus=Gracilimonas taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_40cm_scaffold_12820_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2981..4000)
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RBG_16_Chloroflexi_63_12_curated
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] id=12554436 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
13_1_40cm_scaffold_12820_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4076..4546)
DNA (471bp) protein (157aa)
ilvN; acetolactate synthase small subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1D9_DESAP
13_1_40cm_scaffold_12820_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4700..5269
DNA (570bp) protein (190aa)
ubiX_R; UbiX related subunit of putative (de) carboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Phenylacrylic acid decarboxylase (PAD) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WSJ8_9ACTO
ubiX_R; UbiX related subunit of putative (de) carboxylase
13_1_40cm_scaffold_12820_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5495..5827
DNA (333bp) protein (111aa)
cupin n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B5B8EA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_12820_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5849..6664)
DNA (816bp) protein (272aa)
RNA methylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
RNA methylase id=12556110 bin=CNBR_ACIDO species=Chelatococcus sp. GW1 genus=Chelatococcus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA methylase
13_1_40cm_scaffold_12820_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6803..7738)
DNA (936bp) protein (312aa)
pyrrolo-quinoline quinone n=1 Tax=Schlesneria paludicola RepID=UPI00029A1DF2
pyrrolo-quinoline quinone Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
pyrrolo-quinoline quinone
13_1_40cm_scaffold_12820_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8057..8998)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBX2_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_12820_10
unknown

Not on your lists

comp(8950..9621)
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_40cm_scaffold_12820_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9566..10318)
DNA (753bp) protein (251aa)
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_12820_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10396..10881)
DNA (486bp) protein (162aa)
MacB-like periplasmic core domain protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_12820_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10999..11670)
DNA (672bp) protein (224aa)
Putative ABC transporter protein,ATPase component n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2N4_AROAE
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ABC transporter related protein
13_1_40cm_scaffold_12820_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11667..12440)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017443B5
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF214
13_1_40cm_scaffold_12820_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12437..12796)
DNA (360bp) protein (120aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_12820_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12793..13569)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZCR4_9EURY
protein of unknown function DUF214
yknZ; ABC transporter permease yknZ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_12820_17
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13712..14713)
DNA (1002bp) protein (334aa)
alkane 1-monooxygenase (EC:1.14.15.3)
Fatty acid desaturase family protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NLQ5_9RHOB
Fatty acid desaturase family protein {ECO:0000313|EMBL:EEE36895.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae b
13_1_40cm_scaffold_12820_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14706..15107)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDS9_NITGG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_scaffold_12820_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15205..15705
DNA (501bp) protein (167aa)
mug; G:T/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CBK40096.1}; EC=3.2.2.- {ECO:0000313|EMBL:CBK40096.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA37_9BACT
13_1_40cm_scaffold_12820_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15731..15919
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003639570
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_scaffold_12820_21
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16060..16257)
DNA (198bp) protein (66aa)
SAM-dependent methlyltransferase n=1 Tax=Rhodococcus opacus RepID=UPI00029CC1FD
putative thiol methyltransferase 2
Putative thiol methyltransferase 2 {ECO:0000313|EMBL:AHK31441.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
Displaying 21 items

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