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13_1_40cm_scaffold_1290

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1290_1
RBG_16_Archaea_50_20_curated, Archaea

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2..415
DNA (414bp) protein (138aa)
30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S3Ae id=24615418 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
small subunit ribosomal protein S3Ae
13_1_40cm_scaffold_1290_2
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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526..1758
DNA (1233bp) protein (411aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_Bathyarchaeota_48_13_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Methanococcus maripaludis RepID=GLMM_METM7
13_1_40cm_scaffold_1290_3
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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1755..3002
DNA (1248bp) protein (416aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RBG_16_Bathyarchaeota
Bifunctional protein GlmU (EC:2.7.7.23)
Putative bifunctional protein glmU n=1 Tax=uncultured archaeon RepID=D1JGY1_9ARCH
13_1_40cm_scaffold_1290_4
unknown

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comp(3026..3382)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_1290_5
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(3730..4782)
DNA (1053bp) protein (351aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal phosphate cyclase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEW5_PYRF1
13_1_40cm_scaffold_1290_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4945..5274
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z3S6_BELBD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_1290_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5364..5936
DNA (573bp) protein (191aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
Uncharacterized protein n=1 Tax=Pythium ultimum RepID=K3X918_PYTUL
hypothetical protein
13_1_40cm_scaffold_1290_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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5958..6464
DNA (507bp) protein (169aa)
hypothetical protein; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B7Y6_ACIHW
nicotinamide-nucleotide adenylyltransferase
13_1_40cm_scaffold_1290_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(6461..7252)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T8R9_9EURY
hypothetical protein; K09134 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_1290_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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7660..8667
DNA (1008bp) protein (336aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit
13_1_40cm_scaffold_1290_11
RBG_16_Archaea_50_20_curated, Archaea

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8750..9622
DNA (873bp) protein (291aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7H2_9ARCH
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_scaffold_1290_12
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9766..10446)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Anoxybacillus flavithermus TNO-09.006 RepID=M5JCX7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ELK22992.1}; TaxID=1267580 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus TNO-09.006.;"
hypothetical protein
13_1_40cm_scaffold_1290_13
unknown

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comp(11048..12022)
DNA (975bp) protein (325aa)

This feature has no annotations

13_1_40cm_scaffold_1290_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12095..13615)
DNA (1521bp) protein (507aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_13_Bathyarchaeota_46_16b_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN53_THELI
13_1_40cm_scaffold_1290_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(13655..14683)
DNA (1029bp) protein (343aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_16_Archaea_50_20_curated
diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
13_1_40cm_scaffold_1290_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(14628..15692)
DNA (1065bp) protein (355aa)
GldA; glycerol dehydrogenase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_16_Bathyarchaeota_48_13_curated
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=G1PDH_METKA
GldA; glycerol dehydrogenase
13_1_40cm_scaffold_1290_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(15698..17527)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EAY7_9EURY
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1290_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(17538..18278)
DNA (741bp) protein (247aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370362D
geranylgeranylglyceryl phosphate synthase-like protein
13_1_40cm_scaffold_1290_19
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(18292..19455)
DNA (1164bp) protein (388aa)
Geranylgeranyl reductase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY40_THEPD
Uncharacterized protein {ECO:0000313|EMBL:AKG39406.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
geranylgeranyl reductase
13_1_40cm_scaffold_1290_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19482..20186)
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14318.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_1290_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(20295..20534)
DNA (240bp) protein (80aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_scaffold_1290_22
RBG_16_Archaea_50_20_curated, Archaea

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20757..21530
DNA (774bp) protein (258aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E5F94
F420-dependent oxidoreductase
13_1_40cm_scaffold_1290_23
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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21527..22258
DNA (732bp) protein (244aa)
DNA polymerase beta domain protein region n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ED67_PYRF1
DNA polymerase beta domain containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEM39745.1}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus f
13_1_40cm_scaffold_1290_24
RBG_16_Archaea_50_20_curated, Archaea

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22392..23477
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZEJ5_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1290_25
RBG_16_Archaea_50_20_curated, Archaea

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23483..24430
DNA (948bp) protein (316aa)
ATP pyrophosphatase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZK02_THELI
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATP pyrophosphatase
13_1_40cm_scaffold_1290_26
RBG_16_Archaea_50_20_curated, Archaea

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comp(24427..25011)
DNA (585bp) protein (195aa)
mutT/nudix family protein Tax=RBG_16_Archaea_50_20_curated
NUDIX hydrolase id=3462006 bin=GWA2_Elusimicrobia_69_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NUDIX hydrolase, coenzyme A pyrophosphatase family
13_1_40cm_scaffold_1290_27
unknown

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comp(25084..25431)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_scaffold_1290_28
unknown

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comp(25652..25780)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_1290_29
unknown

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comp(25983..26243)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_1290_30
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26355..26885
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I8D5_AERME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX61989.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
Displaying items 1-30 of 52 in total

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