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13_1_40cm_scaffold_1301

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1301_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2..997
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ04_9BACT
membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
membrane protein
13_1_40cm_scaffold_1301_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1165..1740
DNA (576bp) protein (192aa)
AsnC family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
MarR family transcriptional regulator id=14429881 bin=bin3_NC10 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
AsnC family transcriptional regulator
13_1_40cm_scaffold_1301_3
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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1744..2724
DNA (981bp) protein (327aa)
UDP-N-acetylglucosamine dehydratase/epimerase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1R3_ANATU
UDP-N-acetylglucosamine dehydratase/epimerase Tax=RBG_13_Chloroflexi_66_10_curated
UDP-N-acetylglucosamine dehydratase/epimerase
13_1_40cm_scaffold_1301_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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2726..3685
DNA (960bp) protein (320aa)
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=1244732 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dTDP-4-dehydrorhamnose reductase
13_1_40cm_scaffold_1301_5
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3700..4710
DNA (1011bp) protein (337aa)
NAD-dependent dehydratase n=1 Tax=Deinococcus aquatilis RepID=UPI00035CC1E8
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
dTDP-D-glucose 4,6-dehydratase
13_1_40cm_scaffold_1301_6
GWA2_OD1_38_13, Parcubacteria, Bacteria

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4723..5805
DNA (1083bp) protein (361aa)
Radical SAM/SPASM domain protein n=1 Tax=Leptospira weilii str. UI 13098 RepID=M6Q004_9LEPT
Molybdopterin cofactor synthesis protein A {ECO:0000313|EMBL:KKQ56613.1}; TaxID=1618811 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
moaA; molybdenum cofactor biosynthesis protein
13_1_40cm_scaffold_1301_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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5826..6452
DNA (627bp) protein (209aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PRE0_9CYAN
imidazole glycerol phosphate synthase subunit hisH
13_1_40cm_scaffold_1301_8

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6471..7268
DNA (798bp) protein (266aa)
Histidine biosynthesis protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PSY9_9CYAN id=5103378 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine biosynthesis protein
Histidine biosynthesis protein {ECO:0000313|EMBL:AJF62659.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
13_1_40cm_scaffold_1301_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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7255..8067
DNA (813bp) protein (271aa)
Putative short chain dehydrogenase n=1 Tax=Legionella pneumophila RepID=E7BB90_LEGPN
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AIE86636.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gins
13_1_40cm_scaffold_1301_10
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8110..8871
DNA (762bp) protein (254aa)
Putative N-acylneuraminate cytidylyltransferase n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1NWM0_9FLAO
Putative N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:EKY07761.1}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" so
acylneuraminate cytidylyltransferase
13_1_40cm_scaffold_1301_11
Capnocytophaga sp. oral taxon 324, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8868..10178
DNA (1311bp) protein (437aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Aminotransferase, class III n=1 Tax=Capnocytophaga sp. oral taxon 324 str. F0483 RepID=L1PCE7_9FLAO
Aminotransferase, class III {ECO:0000313|EMBL:EKY13145.1}; TaxID=1127691 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga
13_1_40cm_scaffold_1301_12
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

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10219..11310
DNA (1092bp) protein (364aa)
N-acetyl sugar amidotransferase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PRU7_9CYAN id=5103379 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative LPS biosynthesis glycosyl transferase protein Tax=GWA2_OP3_52_8_curated
N-acetyl sugar amidotransferase
13_1_40cm_scaffold_1301_13
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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11322..12377
DNA (1056bp) protein (352aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:EHP89550.1}; EC=2.5.1.56 {ECO:0000313|EMBL:EHP89550.1};; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcace
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KWH3_9EURY
13_1_40cm_scaffold_1301_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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12334..13461
DNA (1128bp) protein (376aa)
Pseudaminic acid biosynthesis-associated protein PseG n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJR4_DESAR
spore coat polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
pseudaminic acid biosynthesis-associated protein PseG
13_1_40cm_scaffold_1301_15
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

13478..14821
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ89751.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211
conserved protein of unknown function
13_1_40cm_scaffold_1301_16
RHI_OD1_Yanofskybacteria_45_19b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14818..15561
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5B4_9PROT
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Yanofskybacteria_45_19b_curated
13_1_40cm_scaffold_1301_17
RHI_OD1_Yanofskybacteria_45_19b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

15558..15755
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Yanofskybacteria_45_19b_curated
13_1_40cm_scaffold_1301_18
unknown

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15743..15925
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_1301_19
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

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16568..16897
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U179_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKS14414.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
13_1_40cm_scaffold_1301_20
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

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16918..18558
DNA (1641bp) protein (547aa)
magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC:1.14.13.81) Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00038048CF
putative Fe-S oxidoreductase
13_1_40cm_scaffold_1301_21
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18587..19312
DNA (726bp) protein (242aa)
Cytidylyltransferase {ECO:0000313|EMBL:EFM22492.1}; EC=2.7.7.- {ECO:0000313|EMBL:EFM22492.1};; TaxID=864563 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
Cytidylyltransferase n=1 Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P1D1_9FIRM
13_1_40cm_scaffold_1301_22
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19305..20351
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000374EEE4
Putative mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:GAK44775.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
13_1_40cm_scaffold_1301_23
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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20367..22250
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG98_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02343.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula form
13_1_40cm_scaffold_1301_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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22247..24037
DNA (1791bp) protein (597aa)
ABC-type multidrug transport system, ATPase and permease component Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Xenobiotic-transporting ATPase id=2171039 bin=GWB2_Nitrospirae_rel_47_37 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ABC-type multidrug transport system, ATPase and permease component
13_1_40cm_scaffold_1301_25
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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24044..24736
DNA (693bp) protein (231aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 25 items

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