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13_1_40cm_scaffold_2268_6

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6253..6966)

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 228.0
  • Bit_score: 295
  • Evalue 8.30e-77
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 229.0
  • Bit_score: 207
  • Evalue 2.10e-50
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 165.0
  • Bit_score: 80
  • Evalue 6.50e-13

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGGGTGCTGGTTGTCGAGGACCAGGTCGACCTCGGCGATGTGTTTCGCGATTTCCTCTCCGAGCTCGGCCACCAGCCGGTCGTCGTCCACACGGCCGAAGCGGCGCTCGTCACGCTCCAGACCGAGCCACTCGACGCGATCTTGCTCGACGTTCAGCTTCCCGGAATGAGTGGGCTCGACTTCCTCCAGCTCCGTCCCGTCCGGGACCTCGGCGTCCCGATCGTCGCGGTCTCCGGCGTCGTCAACGAAACCCAGGCGCGAGAGTGTCTCCAGCTCGGCGCAGCCGACTTCATGGGCAAGCCGATCCAGCTGGACCGCCTGAACGAGGTCCTGACCTTCCTCGAGCCCCACGCAATGAGCCGCCGCGCCGAGCGCGGCGCGCCCTCCGAGCGTCGACACTCGTCACGCGCGCGGCTGGCGATTCCGGCCCGCCTCCTCGAGTACAACGGCCGTGAGCACCAGGGAACCTTGATCGATGTAGGCGTGTCAGGGATGAAGGCAGACCTCGGCGCGGCGCTCGACCCGGACACCGTCGCGAAGGTTGTCTTCACACCTCCCGACGGCGGGCCGCCGATCGAGGTCATCTCGATCCTGCTCAGGGTGGACCCGGACGGCTACGCCTTCACGTTCGTCCGCCTCGATCCGCGAGACGCGGAGCGTCTGCGCAAGCTCAAGCGATCGACGGTCGCACCGGCGGCGCCGAGGCCTTAG
PROTEIN sequence
Length: 238
MRVLVVEDQVDLGDVFRDFLSELGHQPVVVHTAEAALVTLQTEPLDAILLDVQLPGMSGLDFLQLRPVRDLGVPIVAVSGVVNETQARECLQLGAADFMGKPIQLDRLNEVLTFLEPHAMSRRAERGAPSERRHSSRARLAIPARLLEYNGREHQGTLIDVGVSGMKADLGAALDPDTVAKVVFTPPDGGPPIEVISILLRVDPDGYAFTFVRLDPRDAERLRKLKRSTVAPAAPRP*