ggKbase home page

13_1_40cm_scaffold_3905_19

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(15743..17419)

Top 3 Functional Annotations

Value Algorithm Source
putative Efflux transporter, RND family, MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 561.0
  • Bit_score: 742
  • Evalue 6.10e-211
Putative Efflux transporter, RND family, MFP subunit id=2720744 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 561.0
  • Bit_score: 711
  • Evalue 4.80e-202
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 548.0
  • Bit_score: 440
  • Evalue 7.60e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGAGACGCATCGTGTCGGTGGTCATCGTGGCGGTCCTGGTGGGTGGGGGCGTCTTCGCCTACCTCTACACCCAGAGCCGCGGCAATGCCCCAAAGTACCGGGTGGCGCGTGTCGAGCGAGGTCCCCTCACCGCTGCGGTCTCGGCGACCGGCAACCTGAACGCCGTGGTCGTCGTCCAGGTCGGGAGCCAGGTCTCCGGGATGGTCAAGGACCTCATGGTCGACTTCAACTCGATCGTCAAGAAGAACCAGGTCATCGCCCGGATCGACCCGGACATCTTCGAGGCCAGGGTCAACCAGGCGAAGGCGGATCTGGACTCCTCCCGGGCGAACGTCCTGAACCAGGACGCGCAGGTCGAGCGCGCCCGGGCCGACGTCGACAACGCCCGCGCGGGGCTCGTGGAAGCCAAGGCGTTCACCGCCAAGGCCCTGGTGCAGTCCGTGGACGCCAAGCGTGACTTCGACCGGAAGGCGGAGCTGTTCGGTCGCCAGCTCATCGCCAAGAGCGATCTCGACACGTCGCAGGCCACCTACGACGCTGCGGTGGCCCAGCTCGACTCCACCCGGGCGCGAGAGCAGGCGCTCACGTCGGGTATCCAGTCGGCGCTCGCCCAGCTCCGCGTGGCCCAGGCCACCGCCGAGTCCGCGCGTGCGCAGGTGAAGCAGAAGGATGCCGCGCTCAAGCAGGCCCAGGTCGATCTCGACCACACGACGATCCTGGCCCCCGTGGACGGCGTCGTCGTCTCCCGCCAGGTGGACGTCGGCCAGACCGTCGCCGCGAGCCTTCAGGCTCCGGTGCTCTTCACCATCGCCCAGGACCTCACGCGGATGCAGGTCGAGACGAGCGTGGACGAGGCGGACATCGGCCGCATCAAGCTCGACGACCGCGCCGGCTTCACGGTCGACGCGTTTCCCGGGGAAACGTTCGTCGGGACTGTCACGCAGATCCGGAAGGCGGCTCAGATCGTCCAGAACGTCGTCACCTACACGGTGGTCGTCGCGGTGGCGAATCCGACGGGAAAGCTCGTGCCGGGAATGACGGCGAACGTCAAGCTCGTGACCGCGGAGAAGCCGAGCGTCCTGAAGGTTCCGAACGCCGCGCTCCGGTTCCGGCCGGCGGGCGTCGAGGCGGCAGCGCCCAACTCGCCGGCGAGCAGCGGCGAGCCGAGCGGCGGCGCGGCGGGCCGTGGCGCGGCGGGTGGTGTGCAGCCCTCGGTCGAGCAGATACGCGATCGCCTGGTGAAAGAGCTGAAGCTCACTGAGGATCAGCAAACGAAGCTCGAGCCGATCCTGCAGGACAGCCGCGAGCAGCTGCGGGCCCTCCAGGGACTCCCCGAGGCCGACCGTCGCGCGCGCGCCCAGAAAGTCCGTGAGACGTCGCGCGTCAAGGTCCGCGAGATCCTCACCGACGCCCAGAAGGCGCGCTACGACGAGATGGCCGCCGCGTCGGGCGGCGAGGGCCGGGCCGGCATCCAGGGGCGCGTGTGGGTGGTCGGGCCGGATGGCAAGCCGGCGTCGGTCGCGCTGACTCTCGGGCTCAGCGACGGAACCTCCACCGAGGTGCTCCGCGGCGAGATCAACGAGAGCCAGGAGGTGATCGTCGGGCTCCTCGGCGGCGGCCGGAGCGGCGGCGGTCCTCAAGCCCCGCAGCAGGGCACGCCGCGCCTCAGGCTCTGA
PROTEIN sequence
Length: 559
MRRIVSVVIVAVLVGGGVFAYLYTQSRGNAPKYRVARVERGPLTAAVSATGNLNAVVVVQVGSQVSGMVKDLMVDFNSIVKKNQVIARIDPDIFEARVNQAKADLDSSRANVLNQDAQVERARADVDNARAGLVEAKAFTAKALVQSVDAKRDFDRKAELFGRQLIAKSDLDTSQATYDAAVAQLDSTRAREQALTSGIQSALAQLRVAQATAESARAQVKQKDAALKQAQVDLDHTTILAPVDGVVVSRQVDVGQTVAASLQAPVLFTIAQDLTRMQVETSVDEADIGRIKLDDRAGFTVDAFPGETFVGTVTQIRKAAQIVQNVVTYTVVVAVANPTGKLVPGMTANVKLVTAEKPSVLKVPNAALRFRPAGVEAAAPNSPASSGEPSGGAAGRGAAGGVQPSVEQIRDRLVKELKLTEDQQTKLEPILQDSREQLRALQGLPEADRRARAQKVRETSRVKVREILTDAQKARYDEMAAASGGEGRAGIQGRVWVVGPDGKPASVALTLGLSDGTSTEVLRGEINESQEVIVGLLGGGRSGGGPQAPQQGTPRLRL*