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13_1_20cm_4_scaffold_16942

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_16942_trna_1
unknown

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comp(296..367)
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_16942_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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400..723
DNA (324bp) protein (108aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein id=4863495 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_16942_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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735..1220
DNA (486bp) protein (162aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4863498 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_16942_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1226..1495
DNA (270bp) protein (90aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histone family protein DNA-binding protein id=4863501 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histone family protein DNA-binding protein
13_1_20cm_4_scaffold_16942_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1535..2458
DNA (924bp) protein (308aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4) Tax=GWA2_Rokubacteria_70_23_curated
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
putative D-alanyl-D-alanine carboxypeptidase id=2650885 bin=GWF2_Methylomirabilis_70_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_16942_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2455..3108
DNA (654bp) protein (218aa)
haloacid dehalogenase (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=GWA2_Rokubacteria_70_23_curated
Haloacid dehalogenase, type II id=4863507 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
haloacid dehalogenase
13_1_20cm_4_scaffold_16942_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3184..3342)
DNA (159bp) protein (53aa)
fused DNA topoisomerase I/SWI domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fused DNA topoisomerase I/SWI domain-containing protein id=14429651 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin3_NC10 organism_group=NC10
fused DNA topoisomerase I/SWI domain-containing protein
Displaying 7 items

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