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13_1_20cm_4_scaffold_27039

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_27039_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..2145
DNA (2145bp) protein (715aa)
ifoA_iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit Tax=GWA2_Rokubacteria_73_35_curated
Indolepyruvate ferredoxin oxidoreductase, alpha subunit id=1906308 bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ifoA_iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit
13_1_20cm_4_scaffold_27039_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2142..3596
DNA (1455bp) protein (485aa)
ifoB_iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-oxoacid:ferredoxin oxidoreductase, gamma subunit id=1906446 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative indolepyruvate oxidoreductase subunit beta
13_1_20cm_4_scaffold_27039_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3612..4232)
DNA (621bp) protein (207aa)
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component response regulator
Displaying 3 items

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