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13_1_20cm_4_scaffold_13778_5

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(1317..1682)

Top 3 Functional Annotations

Value Algorithm Source
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 121.0
  • Bit_score: 212
  • Evalue 4.70e-52
50S ribosomal protein L18 id=4799428 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 122.0
  • Bit_score: 167
  • Evalue 7.30e-39
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 122.0
  • Bit_score: 146
  • Evalue 4.90e-33

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGATCACGAAGGAGCGGCGGGCGGCGCGCGACCTGCGGCACCGGCGGGTTCGGCGTTACGTGCGCGGGTCCGCGACGCGGCCCCGCCTTGCCGTGTTCCGGAGCCTCAACCATATCTATGCGCAGCTCATCGACGACGACGCGGGGCGGACGCTCCTCGCCGCCGACAGCCGCAGCAAGACATTCCGGGCCCAGCACACGACCGGCGGCAACGTTGCCGCGGCGAAGGCGGTCGGCGAGCTCCTCGCCCAGCAGGCCAAGGCCCGCGGGATCGACCGGGTGGTGTTCGACCGCGGAGGCTACAGGTACCATGGGCGGGTGAAGGCGCTTGCCGACGCGGCCCGCGCTGGCGGACTGGGATTTTAG
PROTEIN sequence
Length: 122
MITKERRAARDLRHRRVRRYVRGSATRPRLAVFRSLNHIYAQLIDDDAGRTLLAADSRSKTFRAQHTTGGNVAAAKAVGELLAQQAKARGIDRVVFDRGGYRYHGRVKALADAARAGGLGF*