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13_1_20cm_4_scaffold_13778

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_13778_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(1..141)
DNA (141bp) protein (47aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein translocase subunit SecY id=4799424 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
secY; preprotein translocase, membrane subunit SecY
13_1_20cm_4_scaffold_13778_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(138..605)
DNA (468bp) protein (156aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L15 id=4666306 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L15
13_1_20cm_4_scaffold_13778_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(595..783)
DNA (189bp) protein (63aa)
50S ribosomal protein L30 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L30 id=4666305 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmD; 50S ribosomal protein L30
13_1_20cm_4_scaffold_13778_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(764..1300)
DNA (537bp) protein (179aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S5 id=4666304 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S5
13_1_20cm_4_scaffold_13778_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(1317..1682)
DNA (366bp) protein (122aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L18 id=4799428 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplR; 50S ribosomal protein L18
13_1_20cm_4_scaffold_13778_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(1679..2227)
DNA (549bp) protein (183aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=GWA2_Rokubacteria_73_35_curated
50S ribosomal protein L6 id=4666302 bin=GWA2_Methylomirabilis_73_35 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L6
13_1_20cm_4_scaffold_13778_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(2234..2629)
DNA (396bp) protein (132aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=GWA2_Rokubacteria_73_35_curated
30S ribosomal protein S8 id=4716768 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsH; 30S ribosomal protein S8
13_1_20cm_4_scaffold_13778_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(2634..2819)
DNA (186bp) protein (62aa)
rpsZ; 30S ribosomal protein S14 Tax=GWA2_Rokubacteria_73_35_curated
50S ribosomal protein L5 id=4666301 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsZ; 30S ribosomal protein S14
13_1_20cm_4_scaffold_13778_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(2827..3522)
DNA (696bp) protein (232aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L5 id=4799432 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplE; 50S ribosomal protein L5
13_1_20cm_4_scaffold_13778_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(3528..3725)
DNA (198bp) protein (66aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L24 id=4666300 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L24
Displaying 10 items

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