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13_1_20cm_4_scaffold_4454_2

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(843..2054)

Top 3 Functional Annotations

Value Algorithm Source
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 403.0
  • Bit_score: 609
  • Evalue 2.60e-171
Type 4 fimbrial assembly protein pilC id=3773055 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 404.0
  • Bit_score: 533
  • Evalue 2.20e-148
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 405.0
  • Bit_score: 427
  • Evalue 3.70e-117

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGCTGTGTTCGCGTACAGGGGACGCGCGGGCGGCGGCGCCGTGACGGGTGAGATCGAGGCGGACAGCCGCCCGGCCGCCGTCACCGCGCTGCGGGCCAAGGGCGTCATCGCGACGTCGGTGCAGGAGAAGGCGGTCAAGGCCGCCGCCGCGGCGGCGCCGAAGAAGTTCGGGGGCAGCGTCAAGGACAAGGACCTCGCGATCTACACCCGGCAATTCTCGACCATGGTCGACGCCGGCCTGCCGATCGCGCAGTGCCTGCAGATCCTCTCCGAGCAGAACGACTCCAAAACGCTGCGCGACGTGACGGCGCGCATCGCCGCGGACGTCCAGGGCGGCGCGACGCTCGCGGAGTCGTTCGGTAAGTACCCGAAGACCTTCGACCATCTGTTCACGAACATGCTGGCCGTCGGCGAGTCCGGCGGCGTGCTCGACGTCGTCCTCCAGCGGTTGTCCGGCTACATCGAGAAAGCGGCCAAGCTGAAGGCCAAGGTCAAGAGCGCGATGGTCTATCCGGTCACGATCATCGGCGTGGCGTGCCTCGTCATCATCTTCATGATGATCTTCGTGCTGCCGACCTTCGCGAACATGTTCAAGAACATGGGCGCCGAGCTGCCGCTGCCGACCAAGATCGTCATGTGGATGTCGGACATGACGCGCAAGTACGTCATCGTCATGCTCGCGGGCGTCGCCGCCGCCTTCTACGCCATCAAGCGCTACTACGGCACGGACCAGGGCAGCATGCTGATCGACACCTTCGCGCTGAAGGTGCCGGTCATCGGCATGCTGATCCGCAAGGTGGCCGTGGCGCGCTTCACGCGCACGCTCGGCACCCTGATCTCTTCCGGTGTCCCCATCCTCGAAGGCCTGCTCATCACCGCGCGCTCGGCGGGCAACCGCGTCGTCGAGAAGGCCGTGATGCAGGCGCGCCAGCACGTCACGGCGGGCGGCACGCTGTCCGAGCCGCTGAAGGCGACGCCGGTCTTCCCCCCGATGGTCGTGCACATGATCTCGGTCGGCGAGAACACGGGCGCCCTCGACGCCATGCTCAGCAAGATCGCCGACTTCTACGACGACGAGGTCGACGCCGCGGTTACCGCGCTCACCTCGTTGCTCGAGCCGATGATGATCGTCTTCCTCGGCGTGGTCGTGGGCGGCATCGTGGTGGCCATGTACCTCCCCATCTTCAAGATGGTGACGCTCGTCAAGTGA
PROTEIN sequence
Length: 404
MAVFAYRGRAGGGAVTGEIEADSRPAAVTALRAKGVIATSVQEKAVKAAAAAAPKKFGGSVKDKDLAIYTRQFSTMVDAGLPIAQCLQILSEQNDSKTLRDVTARIAADVQGGATLAESFGKYPKTFDHLFTNMLAVGESGGVLDVVLQRLSGYIEKAAKLKAKVKSAMVYPVTIIGVACLVIIFMMIFVLPTFANMFKNMGAELPLPTKIVMWMSDMTRKYVIVMLAGVAAAFYAIKRYYGTDQGSMLIDTFALKVPVIGMLIRKVAVARFTRTLGTLISSGVPILEGLLITARSAGNRVVEKAVMQARQHVTAGGTLSEPLKATPVFPPMVVHMISVGENTGALDAMLSKIADFYDDEVDAAVTALTSLLEPMMIVFLGVVVGGIVVAMYLPIFKMVTLVK*