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13_1_20cm_4_scaffold_4454_3

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(2070..3800)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 579.0
  • Bit_score: 873
  • Evalue 1.40e-250
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 579.0
  • Bit_score: 871
  • Evalue 3.70e-250
pilB; type IV pilus biogenesis ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 570.0
  • Bit_score: 634
  • Evalue 2.80e-179

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGCGCACGGAAAACTCGGCCAGCCCCAGACCCGGCGCCTCGGGGACCTCCTGGTCGCCGAGGGACTGATCACCGAGGCTCAACTCAGGCAAGCCCTCGCCGAGCAGAAGGGCAAGACCGAAAAGCTCGGCTCGATCCTTGCGCGCCTCGGCTTCATCACCGAGGAGCAGCTGATCGGCTTCCTCTCGCGGCAGTACGGCATCCCCTCCATCACGCTGAGCAACATCGACGTCGACGCGGAGACGCTGCGCCTCGTTCCCGCGCCGATCGCCCGCAAGTACGAGGTCCTCCCGGTCAAGCGCATCGGCGGCACCCTCACGCTGGCGATGGCCGACCCAACGAACGTGTTCGCGCTCGACGACGTCGCCTTCATGACGAGCCTGCAGATCCTGCCGGTGGTGGCGCCGCAGGCGGCGATCCGCAAGGCGATCGAGAAGCACTACGAGGCCGGGCAGGCGTCGATGATCGAGATGATGACGGAGATCACCGCCGACGCGAACGTCGAGGTGCTCGAGGGCGAGGCCGAAGGCGCGGGCGTCGACGTCTTCGAGCTCAAGGAGTCCGCCGACGAGGCTCCCGTCGTCAAGCTCGTGAACATGGTGCTCGTCGACGCGATCCGCAAGGGCGCCTCCGACCTGCACTGGGAGCCGTACGAGAAGCACTTCCGCATCCGATTCCGCATCGACGGCGTGCTGCACGAGATGCTCTCGCCGCCGAAGCGGCTGGAGCCCGCGATCATCTCGCGGCTGAAGATCATGTCGAACCTCGACATCTCCGAGCGCCGCGTGCCTCAGGACGGCCGCATCAAGCTGCGCTTCGGCCATCGCGAGATCGATTTCCGCGTGTCGGTCCTGCCGACGATCTTCGGCGAGAAGGCCGTCCTCCGAATCCTCGACAAGGAGTCGCTGCAGCTCGACCTTACCAAGCTCGGCTTCGATCCGTGGAGCTTCGAGAAGTTCAGCCACGCGATCCACCAGCCGTACGGCATGGTGTTGATCACGGGACCGACCGGCTCGGGCAAGACGACCACGCTCTACTCGGCGATCGCGACGATCAACTCGCCCGAGCACAACATCATGACGGCCGAGGACCCCGTCGAGTACAACCTCAAGGGCGTCAACCAGGTCCAGGTCAACGAGGGGGTGGGCCGCACGTTCGCCGCCGTCCTGCGATCCTTCCTGCGCCAGGACCCGGACGTGATCCTCGTCGGTGAGACGCGCGACCTCGAGACCGCGCAGATCTCCATCCGCGCCGCCCTCACGGGCCACCTGGTCTTCACGACGCTGCACACGAACGACTGCCCGTCGACGGTGGCGCGGCTGTTCGACATGGGCATCCAGCCGTTCCTGCTCTCCTCGGCGCTGCTGCTGATCCTCGCGCAGCGGCTGGGCCGACGGATCTGCAAGGAGTGCAAGCAGCCGATGGAGGGCAAGGAAGAGGACCTGGTGCCCTACGGCCATGTGCCGCAGGGGCGCGAGAACGTGACGTTTTCTCGCGGCAAGGGCTGCGCGACCTGCAACTTCACGGGCATGAAGGGCCGAGTGGCCATCTATGAAGTGATGCCCGTCACCGAGCCACTTCGTGACATGATCCTGAAGAACGCCGCGACCGCGGACATCCGGGAACAGGCGCAGAAGGACGGGATGAAGACCCTCCGCCAGTCCGGCTTGATGAAGGTGATCGAGGGGACCACGACGATCGAAGAAGTGTTGCGCGTTACGTTGTCCTAG
PROTEIN sequence
Length: 577
MAHGKLGQPQTRRLGDLLVAEGLITEAQLRQALAEQKGKTEKLGSILARLGFITEEQLIGFLSRQYGIPSITLSNIDVDAETLRLVPAPIARKYEVLPVKRIGGTLTLAMADPTNVFALDDVAFMTSLQILPVVAPQAAIRKAIEKHYEAGQASMIEMMTEITADANVEVLEGEAEGAGVDVFELKESADEAPVVKLVNMVLVDAIRKGASDLHWEPYEKHFRIRFRIDGVLHEMLSPPKRLEPAIISRLKIMSNLDISERRVPQDGRIKLRFGHREIDFRVSVLPTIFGEKAVLRILDKESLQLDLTKLGFDPWSFEKFSHAIHQPYGMVLITGPTGSGKTTTLYSAIATINSPEHNIMTAEDPVEYNLKGVNQVQVNEGVGRTFAAVLRSFLRQDPDVILVGETRDLETAQISIRAALTGHLVFTTLHTNDCPSTVARLFDMGIQPFLLSSALLLILAQRLGRRICKECKQPMEGKEEDLVPYGHVPQGRENVTFSRGKGCATCNFTGMKGRVAIYEVMPVTEPLRDMILKNAATADIREQAQKDGMKTLRQSGLMKVIEGTTTIEEVLRVTLS*